WormBase Tree Display for Gene: WBGene00162148

WBGene00162148 SMap: S_parent: Sequence: Cbre_Contig716
  Identity: Version: 2
    Name: CGC_name: Cbn-arc-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN23423
      Molecular_name: CBN23423
        CBN23423.1
        CN06945
      Other_name: CBN23423
        Cbn-arc-1 From_analysis: Inferred_from_orthology
      Public_name: Cbn-arc-1.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-arc-1
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-arc-1.1
                Other_name: Cbn-arc-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: arc
    RNASeq_FPKM: WBls:0000002 0.438987 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        1.58604 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        1.62306 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        1.65866 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        1.73128 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        1.76375 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        1.8869 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        2.261 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        6.56268 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
      WBls:0000004 1.92595 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        3.85189 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 1.49916 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        2.24588 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        2.38203 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        2.48961 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        3.56933 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 2.51127 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        3.15473 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        3.79819 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (16)
      WBls:0000101 2.51127 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        3.70434 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00221167
      00221168
      00221169
    Ortholog (29)
    Paralog (53)
    Structured_description: Automated_description: Predicted to enable GTP binding activity; GTPase activity; and zinc ion binding activity. Is an ortholog of C. elegans arc-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN23423
    Corresponding_transcript: CBN23423.1
    Other_sequence: Tcol_isotig09182
      Tcol_isotig14597
      Oden_isotig15279
      Tcol_isotig09183
  Experimental_info: Microarray_results: GPL14142_CBN23423_391-450_0.572_220_C
      GPL14142_CBN23423_1212-1271_0.922_2_B
      GPL14142_CBN23423_1282-1341_0.940_1_A
  Method: Gene