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WormBase Tree Display for Gene: WBGene00162859

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Name Class

WBGene00162859SMapS_parentSequenceCbre_Contig311
IdentityVersion2
NameCGC_nameCbn-unc-40.2From_analysisInferred_from_orthology
Sequence_nameCBN24134
Molecular_nameCBN24134
CBN24134.1
CN16484
Other_nameCBN24134
Cbn-unc-40From_analysisInferred_from_orthology
Public_nameCbn-unc-40.2
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-40
220 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameCbn-unc-40.2
Other_nameCbn-unc-40
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000002 (11)
WBls:000000413.3183From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
26.6367From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002412.7938From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
13.8482From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
14.6906From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
16.2135From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
9.82769From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:00000386.91613From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
7.07151From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
7.22689From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:00001016.16231From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
6.58299From_analysisRNASeq.brenneri.total_over_all_stages.control_median
OrthologWBGene00006776Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00035291Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00060358Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00126223Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
CBOVI.g10693Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6080Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6416Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9390Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g9393Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17082Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7666Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1487Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18061Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9327Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g23251Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00095.g4203Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00095.g4204Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13295.g24171Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-40Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15165Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00491.g12060Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06376Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001309Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06699Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g17054Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10282300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00113211Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00226094Brugia malayiFrom_analysisWormBase-Compara
chrI_pilon.g978Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00210117Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00238359Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00262661Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297116Trichuris murisFrom_analysisWormBase-Compara
WBGene00301123Trichuris murisFrom_analysisWormBase-Compara
Paralog (29)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans unc-40. In C. elegans, unc-40 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN24134
Corresponding_transcriptCBN24134.1
Other_sequence (17)
MethodGene