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WormBase Tree Display for Gene: WBGene00163993

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Name Class

WBGene00163993SMapS_parentSequenceCbre_Contig345
IdentityVersion6
NameCGC_nameCbn-egl-19From_analysisInferred_from_orthology
Sequence_nameCBN25268
Molecular_name (3)
Other_nameCBN25268
Cbn-unc-2From_analysisInferred_from_orthology
Public_nameCbn-egl-19
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-2
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbn-egl-19
Other_nameCbn-unc-2
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:25WBPerson1983Name_changeCGC_nameCbn-egl-19
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameCbn-egl-19
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classegl
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
2.02969From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
4.05937From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
27.2274From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
29.2744From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
30.0781From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
31.3946From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
36.1636From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:00000385.13674From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
5.15578From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
5.17481From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:00001012.93483From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
3.28861From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00222672
00222673
00222674
00222675
00222676
00222677
00222678
OrthologWBGene00074138Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00216262Caenorhabditis japonicaFrom_analysisInparanoid_8
CBOVI.g11260Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14641Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14855Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10788Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7498Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5334Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16346Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10312Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g860Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19423Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00172.g6184Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00172.g6185Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00172.g6186Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-egl-19Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21172Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00060.g2928Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18763Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03310Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7338Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40297810Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00001187Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00028228Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00068721Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00079084Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00091694Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00119574Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00223086Brugia malayiFrom_analysisWormBase-Compara
chrIV_pilon.g10827Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00241830Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00267812Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00294334Trichuris murisFrom_analysisWormBase-Compara
WBGene00296871Trichuris murisFrom_analysisWormBase-Compara
WBGene00301820Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00140494Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147845Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153171Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153792Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00154155Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00190957Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00191184Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated calcium channel complex. Is an ortholog of C. elegans egl-19. In C. elegans, egl-19 is involved in several processes, including determination of left/right asymmetry in nervous system; positive regulation of striated muscle contraction; and regulation of pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN25268
Corresponding_CDS_historyCBN25268:np258
Corresponding_transcriptCBN25268.1
Other_sequence (27)
Experimental_infoMicroarray_resultsGPL14142_CBN25268_895-954_0.964_1_A
GPL14142_CBN25268_899-958_0.959_2_B
Remark[190208 pad] The CGC name Cbn-egl-19 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cbn-egl-19 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene