WormBase Tree Display for Gene: WBGene00178550

WBGene00178550 SMap: S_parent: Sequence: Cjap.Contig8538
  Identity: Version: 8
    Name: CGC_name: Cjp-cof-2.2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA22978
      Molecular_name: CJA22978
        CJA22978.1
        JA46229
        CJA22978.2
      Other_name: Cjp-cof-2 From_analysis: Inferred_from_orthology
      Public_name: Cjp-cof-2.2
    Species: Caenorhabditis japonica
    History: Version_change: 1 22 Jan 2009 15:16:36 WBPerson4055 Event: Imported: from WASHU
        2 27 Jan 2009 12:59:26 WBPerson4055 Name_change: CGC_name: Cjp-cof-2
        3 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        4 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cjp-cof-2.2
                Other_name: Cjp-cof-2
        5 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        6 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Cjp-cof-2.2
        7 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        8 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cjp-cof-2.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cof
    RNASeq_FPKM: WBls:0000004 6.98335 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 2.94809 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 3.02917 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        4.00992 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        4.99068 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.675992 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.884761 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.46719 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1.86544 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        2.00593 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        2.03736 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        2.06879 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        2.11419 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        2.17074 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        3.53592 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 2.11419 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        2.52883 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog: WBGene00095724 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00160276 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00194481 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00033502 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00223100 Brugia malayi From_analysis: WormBase-Compara
      WBGene00268748 Brugia malayi From_analysis: WormBase-Compara
      WBGene00000583 Caenorhabditis elegans From_analysis: WormBase-Compara
      CBOVI.g9098 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5568 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g5569 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6198 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1570 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17590 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7690 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3685 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13146 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16364 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g21808 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g6146 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00732.g13765 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-cof-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00420.g11103 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06978 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002716 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01704 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g4864 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10322200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00064309 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrI_pilon.g1110 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248602 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00260462 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292551 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00124176 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00132561 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136809 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: Olfactomedin-like domain. Is an ortholog of C. elegans cof-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA22978
    Corresponding_transcript: CJA22978.1
      CJA22978.2
    Other_sequence: JI166496.1
      JI167173.1
      Dviv_isotig26478
      Oden_isotig21470
  Experimental_info: Expr_pattern: Expr1091911
    Microarray_results: GPL14145_CJA17604_618-677_0.934_3_C
      GPL14145_CJA22978_351-410_0.907_12_C
      GPL14145_CJA22978_452-511_0.964_2_B
      GPL14145_CJA22978_547-606_0.974_1_A
  Remark: [190208 pad] The CGC name Cjp-cof-2.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cjp-cof-2.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene