WormBase Tree Display for Gene: WBGene00219425
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| WBGene00219425 | SMap | S_parent | Sequence | Y54G2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y54G2A.73 | |||||||
| Molecular_name | Y54G2A.73a | ||||||||
| Y54G2A.73a.1 | |||||||||
| CE48590 | |||||||||
| Y54G2A.73b | |||||||||
| CE49025 | |||||||||
| Y54G2A.73b.1 | |||||||||
| Other_name | CELE_Y54G2A.73 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y54G2A.73 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00219425 | |||||
| NDB | locus_tag | CELE_Y54G2A.73 | |||||||
| NCBI | gene | 13192519 | |||||||
| RefSeq | protein | NM_001380122.1 | |||||||
| NM_001307337.1 | |||||||||
| TrEMBL | UniProtAcc | U4PLI1 | |||||||
| U4PB43 | |||||||||
| UniProt_GCRP | UniProtAcc | U4PB43 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 10 Apr 2012 09:04:06 | WBPerson1849 | Event | Split_from | WBGene00021892 | ||
| Split_from | WBGene00021892 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (138) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00073501 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
| CBOVI.g10937 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP21.g7530 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
| CSP31.g15747 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| CSP38.g827 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| CSP39.g6895 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| Cang_2012_03_13_00161.g5938 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
| WBGene00121767 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g9899 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00021890 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in AFD; GABAergic neurons; germ line; and head mesodermal cell based on RNA-seq studies. Is affected by several genes including hsf-1; eat-2; and clk-1 based on RNA-seq and microarray studies. Is affected by eight chemicals including Alovudine; Zidovudine; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54G2A.73a | |||||||
| Y54G2A.73b | |||||||||
| Corresponding_CDS_history | Y54G2A.73:wp239 | ||||||||
| Corresponding_transcript | Y54G2A.73a.1 | ||||||||
| Y54G2A.73b.1 | |||||||||
| Other_sequence | JI464921.1 | ||||||||
| SSC00058_1 | |||||||||
| Associated_feature | WBsf995840 | ||||||||
| WBsf995841 | |||||||||
| WBsf995842 | |||||||||
| WBsf1016996 | |||||||||
| WBsf1016997 | |||||||||
| WBsf1016998 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057461 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1040537 | ||||||||
| Expr2007955 | |||||||||
| Expr2026198 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (58) | |||||||||
| Map_info | Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -6.65907 | |||||||
| Method | Gene |
