WormBase Tree Display for Gene: WBGene00220250
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| WBGene00220250 | SMap | S_parent | Sequence | C09B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C09B9.85 | |||||||
| Molecular_name | C09B9.85 | ||||||||
| C09B9.85.1 | |||||||||
| CE47744 | |||||||||
| Other_name | CELE_C09B9.85 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C09B9.85 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_C09B9.85 | |||||
| Panther | gene | CAEEL|WormBase=WBGene00220250|UniProtKB=J7RNL4 | |||||||
| family | PTHR10736 | ||||||||
| NCBI | gene | 24104191 | |||||||
| RefSeq | protein | NM_001276822.2 | |||||||
| TrEMBL | UniProtAcc | J7RNL4 | |||||||
| UniProt_GCRP | UniProtAcc | J7RNL4 | |||||||
| OMIM | gene | 607854 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 17 Aug 2012 09:56:12 | WBPerson1849 | Event | Split_from | WBGene00015628 | ||
| Split_from | WBGene00015628 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00188869 | ||||||||
| WBVar00188870 | |||||||||
| WBVar00188871 | |||||||||
| WBVar00188872 | |||||||||
| WBVar00908336 | |||||||||
| WBVar00908337 | |||||||||
| WBVar00908338 | |||||||||
| WBVar00908339 | |||||||||
| WBVar00908340 | |||||||||
| WBVar00908341 | |||||||||
| WBVar00908342 | |||||||||
| WBVar00908343 | |||||||||
| WBVar00908344 | |||||||||
| WBVar00908345 | |||||||||
| WBVar00908346 | |||||||||
| WBVar00908347 | |||||||||
| WBVar00908348 | |||||||||
| WBVar00908349 | |||||||||
| WBVar00908350 | |||||||||
| WBVar00908351 | |||||||||
| WBVar00908352 | |||||||||
| WBVar00908353 | |||||||||
| WBVar00908354 | |||||||||
| WBVar01499754 | |||||||||
| WBVar00424506 | |||||||||
| WBVar00424507 | |||||||||
| WBVar00424508 | |||||||||
| WBVar00424509 | |||||||||
| WBVar01896541 | |||||||||
| WBVar01499242 | |||||||||
| WBVar01923291 | |||||||||
| WBVar01499633 | |||||||||
| WBVar01569512 | |||||||||
| WBVar01569513 | |||||||||
| WBVar01569514 | |||||||||
| WBVar01569515 | |||||||||
| WBVar01569516 | |||||||||
| WBVar01488789 | |||||||||
| WBVar01569517 | |||||||||
| WBVar01569518 | |||||||||
| WBVar01569519 | |||||||||
| WBVar01569520 | |||||||||
| WBVar01569521 | |||||||||
| WBVar01581144 | |||||||||
| WBVar01515730 | |||||||||
| WBVar00259978 | |||||||||
| WBVar02133845 | |||||||||
| WBVar02133846 | |||||||||
| WBVar01953906 | |||||||||
| WBVar01500245 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (30) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Automated_description | Predicted to enable chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to be located in plasma membrane. Predicted to be part of chloride channel complex. Human ortholog(s) of this gene implicated in autosomal dominant vitreoretinochoroidopathy and retinal degeneration (multiple). Is an ortholog of several human genes including BEST1 (bestrophin 1); BEST2 (bestrophin 2); and BEST3 (bestrophin 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110396 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12703) | ||||
| DOID:4448 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12703) | ||||||
| DOID:0050661 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12703) | ||||||
| DOID:0050662 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12703) | ||||||
| DOID:0111569 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12703) | ||||||
| Molecular_info | Corresponding_CDS | C09B9.85 | |||||||
| Corresponding_transcript | C09B9.85.1 | ||||||||
| Other_sequence | Hbac_isotig00865 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00000596 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010512 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040166 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2000640 | ||||||||
| Expr2018864 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (67) | |||||||||
| Map_info | Positive | Positive_clone | C09B9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 1.41957 | |||||||
| Reference | WBPaper00055090 | ||||||||
| Method | Gene |
