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WormBase Tree Display for Gene: WBGene00236977

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Name Class

WBGene00236977SMapS_parentSequenceOVOC_OM1b_5
IdentityVersion2
NameCGC_nameOvo-brf-1From_analysisInferred_from_orthology
Sequence_nameOVOC168
Molecular_nameOVOC168
OVOC168.1
OVP04097
OVOC168.2
Public_nameOvo-brf-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:32WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-brf-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbrf
RNASeq_FPKMWBls:00001013.47424From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
5.7427From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:00001073.19189From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010811.5664From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
1.6022From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
7.54421From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
9.46402From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:000066416.1713From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
16.3594From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
16.5474From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00250754
00250755
00250756
Ortholog (28)
ParalogWBGene00243613Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable TBP-class protein binding activity. Predicted to be involved in transcription preinitiation complex assembly. Is an ortholog of C. elegans brf-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC168
Corresponding_transcriptOVOC168.1
OVOC168.2
Other_sequence (27)
MethodGene