Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00240284

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00240284SMapS_parentSequenceOVOC_OM1b_199
IdentityVersion2
NameCGC_nameOvo-apm-3From_analysisInferred_from_orthology
Sequence_nameOVOC3475
Molecular_nameOVOC3475
OVOC3475.1
OVP04525
Public_nameOvo-apm-3
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-apm-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classapm
RNASeq_FPKMWBls:000010112.5487From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
9.6032From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:0000104 (16)
WBls:000010712.5095From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010817.0015From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
23.1015From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
25.6289From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
26.674From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:000066435.2684From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
38.5433From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
41.8181From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00254232
00254233
00254234
OrthologWBGene00146871Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00029947Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00224588Brugia malayiFrom_analysisWormBase-Compara
WBGene00000164Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00129793Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g11712Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g12174Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10939Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13377Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP31.g6149Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g54Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g19043Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4241Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g11225Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00071.g3365Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-apm-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold412.g1098Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00225.g7460Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_03174Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_022238Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01403Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g11435Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0013320Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00060198Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrX_pilon.g18356Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00277444Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00257347Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291140Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00237412Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237496Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241681Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242984Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of clathrin adaptor complex. Is an ortholog of C. elegans apm-3. In C. elegans, apm-3 is involved in lipid storage and lysosome organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC3475
Corresponding_transcriptOVOC3475.1
Other_sequence (65)
MethodGene