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WormBase Tree Display for Gene: WBGene00275882

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Name Class

WBGene00275882SMapS_parentSequencePPA_ChrIII
IdentityVersion6
NameCGC_namePpa-imph-1.2From_analysisInferred_from_orthology
Sequence_namePPA37513
Molecular_namePPA37513
PPA37513.1
PP56967
Public_namePpa-imph-1.2
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-imph-1.2
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:27WBPerson1983Name_changeCGC_namePpa-imph-1.2
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-imph-1.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classimph
RNASeq_FPKMWBls:000003219.093From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
6.36433From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00282594
00282595
Ortholog (27)
ParalogWBGene00089949Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091867Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094439Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276171Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans imph-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA37513
Corresponding_transcriptPPA37513.1
Other_sequenceXI00886
JI168764.1
Oden_isotig25669
CRC11291_1
XIC02466_1
Dviv_isotig00514
JO473884.1
Dviv_isotig00515
CR08454
BMC06723_1
Experimental_infoMicroarray_resultsGPL14372_Probes_47564
GPL14372_Probes_47565
GPL14372_Probes_47566
GPL14372_Probes_47567
GPL14372_Probes_47568
GPL14372_Probes_47569
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
Remark[190208 pad] The CGC name Ppa-imph-1.2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-imph-1.2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene