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WormBase Tree Display for Gene: WBGene00276193

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Name Class

WBGene00276193SMapS_parentSequencePPA_ChrI
IdentityVersion6
NameCGC_namePpa-unc-62From_analysisInferred_from_orthology
Sequence_namePPA37824
Molecular_namePPA37824
PPA37824.1
PP55859
Public_namePpa-unc-62
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-unc-62
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:24WBPerson1983Name_changeCGC_namePpa-unc-62
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-unc-62
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000003216.5027From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010112.0002From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
16.5027From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
19.4979From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00282821
00282822
OrthologWBGene00190249Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00042654Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226341Brugia malayiFrom_analysisWormBase-Compara
WBGene00006796Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00121693Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00242829Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g295Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10173Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20702Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14567Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5639Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26228Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5279Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16989Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4263Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3716Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00180.g6359Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_04614.g18986Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-62Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold543.g3425Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold543.g3427Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00892.g16525Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05283Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019407Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07266Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g558Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50074100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00057910Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00256095Strongyloides rattiFrom_analysisWormBase-Compara
chrV_pilon.g14018Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00292513Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-62. In C. elegans, unc-62 is involved in cell fate specification; muscle cell differentiation; and regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA37824
Corresponding_transcriptPPA37824.1
Other_sequence (42)
Experimental_infoMicroarray_resultsGPL14372_Probes_83149
GPL14372_Probes_83150
GPL14372_Probes_83151
Remark[190208 pad] The CGC name Ppa-unc-62 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-unc-62 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene