WormBase Tree Display for Gene: WBGene00304405
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| WBGene00304405 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-apn-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA46626 | ||||||||
| Molecular_name | PPA46626 | ||||||||
| PPA46626.1 | |||||||||
| PP74854 | |||||||||
| Public_name | Ppa-apn-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 21 Feb 2019 14:49:04 | WBPerson4055 | Event | Created | |||
| 2 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-apn-1 | ||||
| 3 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-apn-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | apn | ||||||||
| RNASeq_FPKM | WBls:0000032 | 71.8138 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 111.808 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 61.2073 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| 71.8138 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| GO_annotation | 00302732 | ||||||||
| 00302733 | |||||||||
| 00302734 | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be involved in DNA repair. Is an ortholog of C. elegans apn-1. In C. elegans, apn-1 is involved in base-excision repair. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA46626 | |||||||
| Corresponding_transcript | PPA46626.1 | ||||||||
| Other_sequence (20) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_15815 | |||||||
| GPL14372_Probes_15817 | |||||||||
| GPL14372_Probes_15818 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| Remark | [210528 pad] The CGC name Ppa-apn-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
