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WormBase Tree Display for Gene: WBGene00304687

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Name Class

WBGene00304687SMapS_parentSequencePPA_ChrIV
IdentityVersion4
NameCGC_namePpa-gdh-1From_analysisInferred_from_orthology
Sequence_namePPA46908
Molecular_namePPA46908
PPA46908.1
PP18922
PPA46908.2
Public_namePpa-gdh-1
SpeciesPristionchus pacificus
HistoryVersion_change121 Feb 2019 14:49:04WBPerson4055EventCreated
208 May 2019 10:09:24WBPerson1983Name_changeCGC_namePpa-gdh-1
328 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-gdh-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgdh
RNASeq_FPKMWBls:000003251.7454From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010128.2138From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
32.8961From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00303005
00303006
00303007
Ortholog (38)
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor. Predicted to be involved in amino acid metabolic process. Is an ortholog of C. elegans gdh-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA46908
Corresponding_CDS_historyPPA46908:pp275
Corresponding_transcriptPPA46908.1
PPA46908.2
Other_sequence (391)
Experimental_infoMicroarray_resultsGPL14372_Probes_76526
GPL14372_Probes_76527
GPL14372_Probes_76529
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_S.marcescens_regulated
WBPaper00041606:PP_X.nematophila_regulated
Remark[210528 pad] The CGC name Ppa-gdh-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene