WormBase Tree Display for Expression_cluster: WBPaper00038060:SUMO-1_downregulated
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| WBPaper00038060:SUMO-1_downregulated | Description | Genes showing < 0.5-fold down-regulated expression (p < 0.001) both in aex-3::His-SUMO-1 or myo-4::His-SUMO-1 C. elegans. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | The Linear Models for Microarray Data (Limma) package using linear model fitting for statistical testing with empirical Bayes variance smoothing procedure were applied to detection of differentially expressed genes in aex-3::His-SUMO-1 and myo-4::His-SUMO-1 nematodes when compared to N2. The obtained p values were corrected for multiple testing using Benjamini and Hochberg false discovery rate procedure. For downstream analysis, genes with FDR corrected p < 0.001 were used including 1,805 probe sets from aex-3::His-SUMO-1 versus N2 comparison (899 under- and 906 overexpressed) and 1,342 probe sets from myo-4::His-SUMO-1 versus N2 comparison (774 under and 568 overexpressed). | ||
| Reference | WBPaper00038060 | ||
| Microarray_results | 177187_at | Fold change: 0.12 | |
| 194066_s_at | Fold change: 0.121 | ||
| 187450_at | Fold change: 0.177 | ||
| 186263_at | Fold change: 0.179 | ||
| 188496_s_at | Fold change: 0.196 | ||
| 175247_s_at | Fold change: 0.22 | ||
| 188078_at | Fold change: 0.225 | ||
| 173335_s_at | Fold change: 0.228 | ||
| 188575_s_at | Fold change: 0.233 | ||
| 181833_at | Fold change: 0.249 | ||
| 189221_at | Fold change: 0.253 | ||
| 182444_at | Fold change: 0.264 | ||
| 173257_s_at | Fold change: 0.277 | ||
| 185969_s_at | Fold change: 0.279 | ||
| 183652_at | Fold change: 0.28 | ||
| 184624_s_at | Fold change: 0.28 | ||
| 192509_at | Fold change: 0.282 | ||
| 183309_at | Fold change: 0.284 | ||
| 172685_x_at | Fold change: 0.285 | ||
| 192737_at | Fold change: 0.286 | ||
| 178909_at | Fold change: 0.287 | ||
| 190075_at | Fold change: 0.294 | ||
| 183232_s_at | Fold change: 0.301 | ||
| 173611_s_at | Fold change: 0.312 | ||
| 188734_at | Fold change: 0.315 | ||
| 188747_at | Fold change: 0.317 | ||
| 172497_x_at | Fold change: 0.32 | ||
| 177942_at | Fold change: 0.32 | ||
| 173480_s_at | Fold change: 0.322 | ||
| 172825_x_at | Fold change: 0.33 | ||
| 172874_x_at | Fold change: 0.331 | ||
| 172547_x_at | Fold change: 0.339 | ||
| 180256_at | Fold change: 0.34 | ||
| 188463_at | Fold change: 0.345 | ||
| 172824_x_at | Fold change: 0.347 | ||
| 182439_at | Fold change: 0.35 | ||
| 189797_s_at | Fold change: 0.35 | ||
| 173919_s_at | Fold change: 0.354 | ||
| 188028_at | Fold change: 0.356 | ||
| 172618_x_at | Fold change: 0.358 | ||
| 172650_x_at | Fold change: 0.358 | ||
| 172346_x_at | Fold change: 0.36 | ||
| 173235_at | Fold change: 0.36 | ||
| 189584_s_at | Fold change: 0.36 | ||
| 192181_at | Fold change: 0.363 | ||
| 185593_at | Fold change: 0.365 | ||
| 178715_at | Fold change: 0.366 | ||
| 191485_at | Fold change: 0.366 | ||
| 172053_x_at | Fold change: 0.368 | ||
| 190009_at | Fold change: 0.368 | ||
| 191850_s_at | Fold change: 0.368 | ||
| 183207_at | Fold change: 0.369 | ||
| 193213_at | Fold change: 0.372 | ||
| 188358_at | Fold change: 0.374 | ||
| 191515_at | Fold change: 0.375 | ||
| 178441_at | Fold change: 0.38 | ||
| 172733_x_at | Fold change: 0.381 | ||
| 190340_s_at | Fold change: 0.383 | ||
| 172764_x_at | Fold change: 0.385 | ||
| 171795_x_at | Fold change: 0.386 | ||
| 176471_at | Fold change: 0.388 | ||
| 180453_at | Fold change: 0.388 | ||
| 191872_at | Fold change: 0.389 | ||
| 174075_at | Fold change: 0.39 | ||
| 187829_s_at | Fold change: 0.39 | ||
| 179499_s_at | Fold change: 0.391 | ||
| 183237_s_at | Fold change: 0.391 | ||
| 190598_at | Fold change: 0.395 | ||
| 178299_at | Fold change: 0.397 | ||
| 172387_x_at | Fold change: 0.398 | ||
| 173576_at | Fold change: 0.4 | ||
| 190307_s_at | Fold change: 0.401 | ||
| 177375_at | Fold change: 0.402 | ||
| 182420_at | Fold change: 0.404 | ||
| 189482_s_at | Fold change: 0.407 | ||
| 189678_at | Fold change: 0.407 | ||
| 189921_at | Fold change: 0.407 | ||
| 177489_at | Fold change: 0.41 | ||
| 172641_x_at | Fold change: 0.412 | ||
| 191688_at | Fold change: 0.412 | ||
| 190373_at | Fold change: 0.413 | ||
| 172689_x_at | Fold change: 0.415 | ||
| 193327_at | Fold change: 0.416 | ||
| 193958_at | Fold change: 0.417 | ||
| 177868_s_at | Fold change: 0.418 | ||
| 178129_at | Fold change: 0.419 | ||
| 192026_at | Fold change: 0.419 | ||
| 179557_at | Fold change: 0.42 | ||
| 188473_s_at | Fold change: 0.42 | ||
| 175772_s_at | Fold change: 0.421 | ||
| 180614_at | Fold change: 0.422 | ||
| 183913_s_at | Fold change: 0.423 | ||
| 189762_at | Fold change: 0.423 | ||
| 172236_x_at | Fold change: 0.424 | ||
| 185357_at | Fold change: 0.424 | ||
| 177729_at | Fold change: 0.425 | ||
| 190360_s_at | Fold change: 0.425 | ||
| 192333_at | Fold change: 0.426 | ||
| 177470_at | Fold change: 0.428 | ||
| 185454_s_at | Fold change: 0.43 | ||
| 176743_s_at | Fold change: 0.431 | ||
| 183666_at | Fold change: 0.432 | ||
| 172595_x_at | Fold change: 0.434 | ||
| 193321_at | Fold change: 0.434 | ||
| 188128_at | Fold change: 0.437 | ||
| 190566_at | Fold change: 0.437 | ||
| 192118_s_at | Fold change: 0.441 | ||
| 183009_at | Fold change: 0.442 | ||
| 187121_at | Fold change: 0.443 | ||
| 183438_s_at | Fold change: 0.446 | ||
| 172093_x_at | Fold change: 0.448 | ||
| 172417_x_at | Fold change: 0.449 | ||
| 177368_at | Fold change: 0.449 | ||
| 181014_at | Fold change: 0.449 | ||
| 178508_at | Fold change: 0.451 | ||
| 188046_s_at | Fold change: 0.451 | ||
| 192216_at | Fold change: 0.452 | ||
| 171737_x_at | Fold change: 0.453 | ||
| 183621_at | Fold change: 0.453 | ||
| 188364_s_at | Fold change: 0.453 | ||
| 189968_s_at | Fold change: 0.453 | ||
| 177951_s_at | Fold change: 0.456 | ||
| 174902_at | Fold change: 0.46 | ||
| 189580_at | Fold change: 0.46 | ||
| 189913_at | Fold change: 0.46 | ||
| 172363_x_at | Fold change: 0.461 | ||
| 172107_x_at | Fold change: 0.462 | ||
| 190999_at | Fold change: 0.462 | ||
| 182104_at | Fold change: 0.463 | ||
| 190499_s_at | Fold change: 0.464 | ||
| 172761_x_at | Fold change: 0.465 | ||
| 172259_x_at | Fold change: 0.466 | ||
| 172593_x_at | Fold change: 0.466 | ||
| 181257_at | Fold change: 0.466 | ||
| 182561_at | Fold change: 0.467 | ||
| 174839_at | Fold change: 0.468 | ||
| 174978_at | Fold change: 0.468 | ||
| 178248_at | Fold change: 0.469 | ||
| 186337_at | Fold change: 0.471 | ||
| 188037_at | Fold change: 0.474 | ||
| 180727_at | Fold change: 0.476 | ||
| 185270_at | Fold change: 0.477 | ||
| 191379_at | Fold change: 0.478 | ||
| 183691_at | Fold change: 0.479 | ||
| 172763_x_at | Fold change: 0.482 | ||
| 192992_at | Fold change: 0.482 | ||
| 178889_at | Fold change: 0.483 | ||
| 179875_at | Fold change: 0.483 | ||
| 177279_at | Fold change: 0.485 | ||
| 182323_at | Fold change: 0.485 | ||
| 184733_at | Fold change: 0.485 | ||
| 182386_s_at | Fold change: 0.486 | ||
| 186927_s_at | Fold change: 0.486 | ||
| 188947_at | Fold change: 0.486 | ||
| 190234_at | Fold change: 0.486 | ||
| 178713_at | Fold change: 0.488 | ||
| 189595_s_at | Fold change: 0.489 | ||
| 173242_s_at | Fold change: 0.49 | ||
| 181034_at | Fold change: 0.49 | ||
| 181410_s_at | Fold change: 0.49 | ||
| 184102_s_at | Fold change: 0.49 | ||
| 183975_s_at | Fold change: 0.491 | ||
| 186974_s_at | Fold change: 0.491 | ||
| 188337_at | Fold change: 0.491 | ||
| 188705_s_at | Fold change: 0.491 | ||
| 173004_s_at | Fold change: 0.492 | ||
| 174102_at | Fold change: 0.493 | ||
| 171956_s_at | Fold change: 0.494 | ||
| 186521_at | Fold change: 0.494 | ||
| 183320_at | Fold change: 0.495 | ||
| 179510_at | Fold change: 0.496 | ||
| 177032_at | Fold change: 0.497 | ||
| 175390_at | Fold change: 0.498 | ||
| 190225_s_at | Fold change: 0.5 | ||
| 172055_x_at | Fold change: 0.502 | ||
| 178149_s_at | Fold change: 0.503 | ||
| 192968_s_at | Fold change: 0.504 | ||
| 175008_at | Fold change: 0.505 | ||
| 172148_x_at | Fold change: 0.507 | ||
| 180505_at | Fold change: 0.507 | ||
| 180840_at | Fold change: 0.507 | ||
| 181956_at | Fold change: 0.507 | ||
| 184368_at | Fold change: 0.509 | ||
| 177481_at | Fold change: 0.512 | ||
| 180624_s_at | Fold change: 0.512 | ||
| 175393_at | Fold change: 0.514 | ||
| 189700_at | Fold change: 0.515 | ||
| 180040_s_at | Fold change: 0.516 | ||
| 193914_at | Fold change: 0.516 | ||
| 175272_at | Fold change: 0.517 | ||
| 187910_at | Fold change: 0.518 | ||
| 192699_s_at | Fold change: 0.518 | ||
| 185646_at | Fold change: 0.519 | ||
| 186464_s_at | Fold change: 0.519 | ||
| 172760_x_at | Fold change: 0.52 | ||
| 180240_at | Fold change: 0.521 | ||
| 188632_at | Fold change: 0.521 | ||
| 175347_s_at | Fold change: 0.522 | ||
| 181707_at | Fold change: 0.522 | ||
| 187260_s_at | Fold change: 0.522 | ||
| 192878_at | Fold change: 0.522 | ||
| 173431_at | Fold change: 0.523 | ||
| 185424_s_at | Fold change: 0.524 | ||
| 193741_at | Fold change: 0.524 | ||
| 182471_at | Fold change: 0.525 | ||
| 190348_at | Fold change: 0.525 | ||
| 172741_x_at | Fold change: 0.526 | ||
| 180766_at | Fold change: 0.528 | ||
| 188180_at | Fold change: 0.532 | ||
| 184396_at | Fold change: 0.533 | ||
| 188391_at | Fold change: 0.533 | ||
| 185846_at | Fold change: 0.534 | ||
| 193758_at | Fold change: 0.534 | ||
| 190217_at | Fold change: 0.535 | ||
| 173124_s_at | Fold change: 0.536 | ||
| 174548_at | Fold change: 0.537 | ||
| 182966_at | Fold change: 0.537 | ||
| 186886_s_at | Fold change: 0.537 | ||
| 192682_at | Fold change: 0.537 | ||
| 172671_x_at | Fold change: 0.538 | ||
| 178704_s_at | Fold change: 0.538 | ||
| 179947_at | Fold change: 0.538 | ||
| 183230_at | Fold change: 0.538 | ||
| 172787_x_at | Fold change: 0.539 | ||
| 174481_at | Fold change: 0.541 | ||
| 183641_at | Fold change: 0.541 | ||
| 184431_at | Fold change: 0.541 | ||
| 175662_at | Fold change: 0.542 | ||
| 177312_at | Fold change: 0.542 | ||
| 190223_at | Fold change: 0.542 | ||
| 173698_s_at | Fold change: 0.544 | ||
| 181326_at | Fold change: 0.544 | ||
| 171905_x_at | Fold change: 0.545 | ||
| 188675_at | Fold change: 0.545 | ||
| 191057_s_at | Fold change: 0.545 | ||
| 189079_s_at | Fold change: 0.546 | ||
| 188312_at | Fold change: 0.547 | ||
| 179686_at | Fold change: 0.549 | ||
| 178236_s_at | Fold change: 0.55 | ||
| 187278_at | Fold change: 0.55 | ||
| 171901_x_at | Fold change: 0.551 | ||
| 172102_x_at | Fold change: 0.551 | ||
| 185802_at | Fold change: 0.552 | ||
| 173877_s_at | Fold change: 0.555 | ||
| 176474_at | Fold change: 0.556 | ||
| 190228_s_at | Fold change: 0.556 | ||
| 177870_at | Fold change: 0.557 | ||
| 175705_s_at | Fold change: 0.558 | ||
| 176069_s_at | Fold change: 0.558 | ||
| 187201_s_at | Fold change: 0.558 | ||
| 193825_at | Fold change: 0.56 | ||
| 181305_s_at | Fold change: 0.561 | ||
| 184890_at | Fold change: 0.561 | ||
| 193818_s_at | Fold change: 0.561 | ||
| 182754_at | Fold change: 0.563 | ||
| 175707_s_at | Fold change: 0.564 | ||
| 182980_at | Fold change: 0.564 | ||
| 177586_at | Fold change: 0.565 | ||
| 171849_x_at | Fold change: 0.566 | ||
| 176327_s_at | Fold change: 0.566 | ||
| 177670_at | Fold change: 0.566 | ||
| 189480_at | Fold change: 0.567 | ||
| 180476_at | Fold change: 0.57 | ||
| 185640_s_at | Fold change: 0.57 | ||
| 176441_at | Fold change: 0.571 | ||
| 184558_at | Fold change: 0.571 | ||
| 186362_s_at | Fold change: 0.571 | ||
| 184051_at | Fold change: 0.572 | ||
| 190193_s_at | Fold change: 0.572 | ||
| 192908_s_at | Fold change: 0.572 | ||
| 188201_at | Fold change: 0.573 | ||
| 193073_at | Fold change: 0.573 | ||
| 193087_s_at | Fold change: 0.575 | ||
| 193636_s_at | Fold change: 0.575 | ||
| 180818_at | Fold change: 0.577 | ||
| 179930_at | Fold change: 0.578 | ||
| 182941_at | Fold change: 0.578 | ||
| 189814_s_at | Fold change: 0.578 | ||
| 194203_x_at | Fold change: 0.578 | ||
| 186308_s_at | Fold change: 0.579 | ||
| 193419_at | Fold change: 0.581 | ||
| 174581_s_at | Fold change: 0.582 | ||
| 183818_s_at | Fold change: 0.582 | ||
| 183941_s_at | Fold change: 0.582 | ||
| 191034_s_at | Fold change: 0.582 | ||
| 175424_at | Fold change: 0.583 | ||
| 184150_at | Fold change: 0.583 | ||
| 178771_at | Fold change: 0.584 | ||
| 187447_at | Fold change: 0.585 | ||
| 172228_x_at | Fold change: 0.586 | ||
| 179818_at | Fold change: 0.586 | ||
| 174632_at | Fold change: 0.587 | ||
| 177276_at | Fold change: 0.587 | ||
| 180765_at | Fold change: 0.587 | ||
| 191904_s_at | Fold change: 0.587 | ||
| 175819_s_at | Fold change: 0.588 | ||
| 187503_at | Fold change: 0.589 | ||
| 187329_at | Fold change: 0.59 | ||
| 190819_s_at | Fold change: 0.592 | ||
| 194238_x_at | Fold change: 0.592 | ||
| 172661_x_at | Fold change: 0.593 | ||
| 178343_s_at | Fold change: 0.593 | ||
| 188324_at | Fold change: 0.593 | ||
| 172800_x_at | Fold change: 0.594 | ||
| 188229_s_at | Fold change: 0.594 | ||
| 176544_at | Fold change: 0.596 | ||
| 183575_at | Fold change: 0.596 | ||
| 187033_at | Fold change: 0.596 | ||
| 188331_s_at | Fold change: 0.596 | ||
| 187438_s_at | Fold change: 0.597 | ||
| 172335_x_at | Fold change: 0.598 | ||
| 173518_s_at | Fold change: 0.598 | ||
| 172731_x_at | Fold change: 0.6 | ||
| 173252_s_at | Fold change: 0.6 | ||
| 192674_s_at | Fold change: 0.6 | ||
| 182919_at | Fold change: 0.601 | ||
| 188790_at | Fold change: 0.602 | ||
| 173579_s_at | Fold change: 0.603 | ||
| 174906_s_at | Fold change: 0.603 | ||
| 181428_at | Fold change: 0.603 | ||
| 178944_at | Fold change: 0.605 | ||
| 173567_s_at | Fold change: 0.606 | ||
| 186462_at | Fold change: 0.606 | ||
| 179555_at | Fold change: 0.607 | ||
| 189387_at | Fold change: 0.608 | ||
| 172426_x_at | Fold change: 0.609 | ||
| 173466_s_at | Fold change: 0.61 | ||
| 177598_at | Fold change: 0.61 | ||
| 182491_at | Fold change: 0.61 | ||
| 188059_at | Fold change: 0.611 | ||
| 181557_at | Fold change: 0.613 | ||
| 172679_x_at | Fold change: 0.614 | ||
| 174469_at | Fold change: 0.615 | ||
| 185474_at | Fold change: 0.615 | ||
| 180562_at | Fold change: 0.616 | ||
| 182320_at | Fold change: 0.616 | ||
| 188311_s_at | Fold change: 0.616 | ||
| 193218_s_at | Fold change: 0.616 | ||
| 188375_at | Fold change: 0.617 | ||
| 172666_x_at | Fold change: 0.618 | ||
| 189972_at | Fold change: 0.618 | ||
| 194235_x_at | Fold change: 0.618 | ||
| 188060_s_at | Fold change: 0.62 | ||
| 176165_at | Fold change: 0.621 | ||
| 188659_at | Fold change: 0.621 | ||
| 189565_at | Fold change: 0.621 | ||
| 190091_at | Fold change: 0.621 | ||
| 172899_x_at | Fold change: 0.622 | ||
| 188527_s_at | Fold change: 0.623 | ||
| 173654_at | Fold change: 0.624 | ||
| 174578_at | Fold change: 0.624 | ||
| 178629_at | Fold change: 0.624 | ||
| 188188_s_at | Fold change: 0.628 | ||
| 185972_at | Fold change: 0.629 | ||
| 190244_s_at | Fold change: 0.629 | ||
| 193793_s_at | Fold change: 0.629 | ||
| 173748_at | Fold change: 0.63 | ||
| 174816_at | Fold change: 0.63 | ||
| 181967_at | Fold change: 0.63 | ||
| 193496_s_at | Fold change: 0.631 | ||
| 193838_s_at | Fold change: 0.634 | ||
| 190579_at | Fold change: 0.636 | ||
| 192596_s_at | Fold change: 0.636 | ||
| 190429_at | Fold change: 0.637 | ||
| 186179_at | Fold change: 0.638 | ||
| 179613_at | Fold change: 0.64 | ||
| 180962_s_at | Fold change: 0.64 | ||
| 190523_s_at | Fold change: 0.64 | ||
| 178068_s_at | Fold change: 0.646 | ||
| 185565_at | Fold change: 0.646 | ||
| 189803_at | Fold change: 0.646 | ||
| 183755_s_at | Fold change: 0.647 | ||
| 184596_s_at | Fold change: 0.647 | ||
| 186941_at | Fold change: 0.647 | ||
| 189602_s_at | Fold change: 0.647 | ||
| 190584_at | Fold change: 0.648 | ||
| 192157_at | Fold change: 0.648 | ||
| 192519_s_at | Fold change: 0.648 | ||
| 174615_at | Fold change: 0.651 | ||
| 185304_s_at | Fold change: 0.651 | ||
| 180115_at | Fold change: 0.652 | ||
| 185608_at | Fold change: 0.652 | ||
| 193486_at | Fold change: 0.652 | ||
| 189114_at | Fold change: 0.653 | ||
| 192712_at | Fold change: 0.653 | ||
| 178751_at | Fold change: 0.654 | ||
| 179285_at | Fold change: 0.654 | ||
| 180490_s_at | Fold change: 0.654 | ||
| 190020_at | Fold change: 0.654 | ||
| 190171_at | Fold change: 0.654 | ||
| 193555_s_at | Fold change: 0.654 | ||
| 183539_s_at | Fold change: 0.655 | ||
| 183064_at | Fold change: 0.657 | ||
| 192518_at | Fold change: 0.657 | ||
| 178609_at | Fold change: 0.658 | ||
| 177374_at | Fold change: 0.659 | ||
| 186418_at | Fold change: 0.659 | ||
| 192454_s_at | Fold change: 0.659 | ||
| 187247_at | Fold change: 0.66 | ||
| 190570_at | Fold change: 0.66 | ||
| 180412_at | Fold change: 0.661 | ||
| 183815_at | Fold change: 0.661 | ||
| 193259_at | Fold change: 0.661 | ||
| 171847_s_at | Fold change: 0.662 | ||
| 188132_at | Fold change: 0.662 | ||
| 191554_at | Fold change: 0.662 | ||
| 192104_at | Fold change: 0.662 | ||
| 178357_at | Fold change: 0.663 | ||
| 183193_at | Fold change: 0.663 | ||
| 186248_at | Fold change: 0.663 | ||
| 183535_at | Fold change: 0.664 | ||
| 187228_at | Fold change: 0.664 | ||
| 190439_s_at | Fold change: 0.664 | ||
| 187660_s_at | Fold change: 0.665 | ||
| 190165_s_at | Fold change: 0.666 | ||
| 192247_at | Fold change: 0.666 | ||
| Gene (396) | |||
| Attribute_of | Microarray_experiment | WBPaper00038060:N2_1 | |
| WBPaper00038060:N2_2 | |||
| WBPaper00038060:N2_3 | |||
| WBPaper00038060:aex-3p-his-SUMO-1-JS62_1 | |||
| WBPaper00038060:aex-3p-his-SUMO-1-JS62_2 | |||
| WBPaper00038060:aex-3p-his-SUMO-1-JS62_3 | |||
| WBPaper00038060:myo-4p-his-SUMO-1-JS63_1 | |||
| WBPaper00038060:myo-4p-his-SUMO-1-JS63_2 | |||
| WBPaper00038060:myo-4p-his-SUMO-1-JS63_3 | |||
| Regulation | Regulated_by_gene | HGNC:12502 | |
| Associated_with | Life_stage | WBls:0000024 |
