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WormBase Tree Display for Expression_cluster: WBPaper00062056:lin-15B(n744)_downregulated

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Name Class

WBPaper00062056:lin-15B(n744)_downregulatedDescriptionTranscripts that showed significantly decreased expression in lin-15B(n744) comparing to in N2 animals at starved L1 larva stage.
SpeciesCaenorhabditis elegans
AlgorithmA gene model was built based on the WS260 annotation. Tag counts for each gene were extracted from STAR aligned BAM files, anddifferential gene expression between N2 and mutant backgrounds was tested using DESeq2. A false discovery rate(FDR) < 0.01 and LFC > 0.5849 was used to define genes as upregulated, and FDR < 0.01 and LFC < -1 was used to define genes asdownregulated.
ReferenceWBPaper00062056
Based_on_WB_Release260
GeneWBGene00022445
WBGene00008220
WBGene00004062
WBGene00020909
WBGene00008596
WBGene00013516
WBGene00022170
WBGene00017881
WBGene00010005
WBGene00021583
WBGene00018188
WBGene00044719
WBGene00012634
WBGene00003663
WBGene00019300
WBGene00004227
WBGene00022515
WBGene00013101
WBGene00011677
WBGene00001460
WBGene00019495
WBGene00004192
WBGene00011167
WBGene00014088
WBGene00004987
WBGene00017363
WBGene00016645
WBGene00014258
WBGene00015270
WBGene00017257
WBGene00017659
WBGene00015731
WBGene00018917
WBGene00001776
WBGene00007565
WBGene00012407
WBGene00008626
WBGene00019549
WBGene00007892
WBGene00017781
WBGene00013976
WBGene00014022
WBGene00007766
WBGene00010215
WBGene00017756
WBGene00009504
WBGene00007487
WBGene00045386
WBGene00017658
WBGene00011180
WBGene00003234
WBGene00000017
WBGene00022254
WBGene00020862
WBGene00011573
WBGene00007241
WBGene00018286
WBGene00007331
WBGene00018465
WBGene00001059
WBGene00006534
WBGene00008589
WBGene00022490
WBGene00016048
WBGene00013576
WBGene00010212
WBGene00022440
WBGene00022609
WBGene00019717
WBGene00018910
WBGene00011899
WBGene00077757
WBGene00016631
WBGene00021160
WBGene00005138
WBGene00004989
WBGene00018915
WBGene00002116
WBGene00008451
WBGene00019734
WBGene00012968
WBGene00000136
WBGene00014793
WBGene00194692
WBGene00044807
WBGene00044099
WBGene00044734
WBGene00021222
WBGene00021224
WBGene00006200
WBGene00044131
WBGene00014189
WBGene00000665
WBGene00001005
WBGene00001252
WBGene00003134
WBGene00003658
WBGene00011869
WBGene00016943
WBGene00017328
WBGene00019978
WBGene00020049
Attribute_ofRNASeq
RegulationRegulated_by_geneWBGene00023497
Associated_withLife_stageWBls:0000024