WormBase Tree Display for RNAi: WBRNAi00087383
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WBRNAi00087383 | Homol | Homol_homol | C12D8:RNAi | ||
---|---|---|---|---|---|
CHROMOSOME_X:RNAi | |||||
W10G6:RNAi | |||||
Sequence_info | DNA_text | atgtcgatgacaagcttgtcaacgaagtctcgaagacaagaagatgttgtcattgagggatggcttcacaagaaaggagagcacattcgaaactggagaccaagatacttcatgatattcaatgatggagccttacttggatttcgagcaaagcctaaggaaggacaaccgtttcctgagccattgaatgattttatgatcaaggatgcagcgacaatgttattcgaaaaaccacgacctaacatgttcatggtaagatgccttcagtggacaactgtcattgagcgaacattctatgcggagtcggcagaagttcgtcagcgttggattcatgctattgagagcatttcaaaaaaatacaaaggcacaaatgcaaatccacaagaggaattaatggaaaccaatcagcagccaaaaattgatgaagacagtgaatttgctggtgcagcgcatgcaattatgggtcaaccatcttcgggacacggtgataattgttcaattgacttcagagcgtctatgattagtattgctgacaccagcgaagctgctaaaagagacaaaatcacaatggaagatttcgattttctcaaagtgctcggtaaaggaacattcggaaaagttatcttgtgcaaggaaaagcgtactcaaaagctttatgccatcaaaattctcaaaaaagatgtaatcattgctcgcgaagaagttgctcacactttgacagaaaatcgagttcttcaaagatgcaagcatccgttccttacggaactgaaatatagtttccaagagcaacactatctttgttttgtgatgcagtttgcgaatggtggagaactttttacgcatgtacgtaaatgtggaacatttagtgaaccaagagcccgattctacggagccgagatcgttcttgctctcggataccttcaccgatgcgatattgtctaccgtgatatgaagcttgaaaatttgcttcttgacaaagatggacatattaaaattgcggattttggattatgtaaagaagaaatcagttttggtgacaaaacaagtactttctgtggaactccggagtatcttgcaccagaggttcttgatgatcatgactacggacgttgtgttgattggtggggagttggagttgtgatgtacgagatgatgtgtggaaggcttccattttattcgaaggatcataataaactattcgaacttatcatggctggtgatctaaggttcccaagcaagttgagtcaagaagctagaactttgctcaccggacttcttgtcaaagatccaactcagcgattgggtggtggacccgaagatgcattggagatttgtagagcagactttttccgtactgtcgattgggaagcaacgtacagaaaagaaatcgagccaccatataagccaaatgtgcagtcagaaactgatactagttactttgataatgaattcacatctcaaccagttcaactgacaccgcctagtagaagcggagcccttgctacagtcgatgagcaagaagaaatgcaatcaaacttcacacaattctcattccacaatgttatgggaagtatcaatcgaattcatgaagcaagtgaagacaacgaagattatgatatgggataa | |||
atgtctactgaaaacgcccatctacaaaaagaagacattgttattgaaagttggcttcacaagaaaggagagcacattcgtaattggcgccccaggtacttcatcttgtttcgagatggaacgttgcttggattccggtcaaagccaaaggaagatcagccgttaccagagccactgaataattttatgattagagacgcagcgacggtttgccttgacaaacctcgaccaaatatgtttatcgtgcgatgtctccaatggaccactgtcattgaacgcacattttatgcggatagcgccgacttccgtcagatgtggattgaagcaattcaagctgtatccagtcacaatcgtttgaaagaaaatgcaggaaataccagcatgcaggaggaagatactaatggaaatccgtctggagaaagtgatgtgaacatggacgcaacaagcacccgttcggataatgattttgagtcaactgtaatgaatatcgacgaaccagaggaagttccaagaaaaaatacagtgacgatggacgattttgacttcctcaaagttctcggtcaaggaaccttcggaaaagttattttgtgcagggagaaaagttctgataagctctacgccattaagattatcagaaaagaaatggtcgttgatcgttctgaggtggcccacactttgactgaaaatcgagttctgtatgcttgcgttcacccttttctcacgctacttaaatacagtttccaagcacaatatcacatctgttttgtgatggagtttgcaaatggtggcgagctgttcacccatcttcagaggtgcaaaacattcagcgaagcacgaacaagattttatggatcggaaatcatacttgctcttggataccttcatcacagaaatattgtgtatcgtgatatgaaactcgaaaatttgcttctcgacagagatggtcacatcaaaatcactgactttgggttgtgcaaagaggaaatcaaatatggagataaaacaagcaccttttgcggaacaccagaataccttgcaccagaggttatcgaagacatcgactatgaccgtagtgttgactggtggggagtcggagtggtcatgtacgaaatgatgtgtggacggcttccattttcagcaaaggagaacggcaaactcttcgaactaattacgacatgtgatttgaagttcccgaataggttaagcccagaagccgtaacattactatctggactactcgaaagggtcccagctaagcggcttggtgccggtcctgatgatgcacgtgaagtttcgagagctgaatttttcaaagatgtggattgggaagcaacattaagaaaagaagtcgaacctccatttaagccaaatgtgatgtctgaaacggacacgagtttctttgacagagagttcacatcaatgccggtccaactgacgcctccacgtagaggggaagaacttccgacagttgatgaggaagaagaattacaagccaacttcatacaatttgcgtcatactacgtgtcgggaagcttggaacgatcttatgatacgaacagaagcgctgacaaatacgaaataagatga | |||||
atggtgaggaaagatgaggtgacatgcaatgttattataggagatgataagaaaactgtggtttacgcgctccgtatcggaaatggcccaattatgcaaaaaacgtttgaagaatatgaaagattttttacaactgaaaaggatatgatcccggctacaattttcactgcgccgaaaaagaagttcctgcaagctgacagcaagttctacgagaaaagacgtgtttggatccttgtgattagtcagcatcttgttgataataatttaagaagtgaggatgtccgtcggttcttccatctcgaaagtccggatgatgatgagaataatgttgatctcggaccaagtgagaggaaaacagccaccgccaatgatttcgattatctgacaactatcggaaaaggaagctttggaagagtttaccaagtcaggcacaaggagaccaaaaaaatctacgccatgaaaattctgtccaaggaacatatcagaaaaaagaacgaggtgaaacacgtcatggcagaaagaaatgtgctcattaacaactttaagcaccctttccttgtttcacttcacttttcgttccaaaataaggagaagctgtattttgtgctcgatcacttgaacggaggagagcttttctctcacctccaacgcgagaaacatttttccgagtcgagaagtcgtttttacgcggccgagattgcatgtgctctgggttatcttcacgagaaaaacattatctacagagatttgaagcctgaaaaccttctgttggacgataaaggttacttggtgctcaccgactttgggctctgtaaagaagatatgcaaggaagcaagacaacttccacattttgtgggacgccggagtacttggccccggaaattattctgaaaaagccttacgacaagactgttgactggtggtgtttgggatcggttctctatgaaatgatttttggattgcctccattctactcaaaagatcataacgagatgtacgacaagatcatcaaccagccacttcgtctcaagcacaacatctctgtgccatgcagtgagctcatcaccgggctcttgcaaaaagaccgttcaaagcgtctgggccatcgcaatgatttccgtgacattcgtgatcatccattcttccttccggttgattgggataagcttctgaatcgtgagcttaaggctccgttcattccgaaagtgaaaaacgcaatggatacatccaatatttcaaaggagttcgtggagattcaaattgatccatcttcgttggcaccgcaacaacttgctgtcactcatcgagatcacgattttgagaactttacattcgtcgacaccaatcgcgttttggtctga | |||||
Experiment | Laboratory | LD | |||
Date | 18 Jan 2008 00:00:00 | ||||
Genotype | SKN-1::GFP; daf-16(mgDf47) | ||||
Treatment | L2 stage worms were placed on these plates and allowed to develop and lay eggs. F1 progeny were scored for the nuclear localization of SKN-1::GFP at the L4 stage | ||||
Delivered_by | Bacterial_feeding | ||||
Inhibits | Predicted_gene | C12D8.10a | Inferred_automatically | RNAi_primary | |
W10G6.2a | Inferred_automatically | RNAi_primary | |||
C12D8.10c | Inferred_automatically | RNAi_primary | |||
W10G6.2b | Inferred_automatically | RNAi_primary | |||
F28H6.1b | Inferred_automatically | RNAi_primary | |||
F28H6.1a | Inferred_automatically | RNAi_primary | |||
C12D8.10b | Inferred_automatically | RNAi_primary | |||
Gene | WBGene00000103 | Inferred_automatically | RNAi_primary | ||
WBGene00000102 | Inferred_automatically | RNAi_primary | |||
WBGene00004789 | Inferred_automatically | RNAi_primary | |||
Transcript | F28H6.1b.1 | Inferred_automatically | RNAi_primary | ||
W10G6.2a.2 | Inferred_automatically | RNAi_primary | |||
C12D8.10a.1 | Inferred_automatically | RNAi_primary | |||
W10G6.2b.1 | Inferred_automatically | RNAi_primary | |||
F28H6.1a.1 | Inferred_automatically | RNAi_primary | |||
C12D8.10c.1 | Inferred_automatically | RNAi_primary | |||
W10G6.2a.1 | Inferred_automatically | RNAi_primary | |||
C12D8.10b.1 | Inferred_automatically | RNAi_primary | |||
Species | Caenorhabditis elegans | ||||
Interaction | WBInteraction000517756 | ||||
Reference | WBPaper00031617 | ||||
Phenotype | WBPhenotype:0001236 | Remark | RNAi knockdown of akt-1;akt-2 and sgk-1 increased the presence in intestinal nuclei of SKN-1::GFP that was expressed from SKN-1op::GFP in daf-16(mgDf47) mutants | ||
Remark | Exact sequence used for RNAi not stated by authors, spliced coding region sequence of C12D8.10a used for curation. | ||||
Exact sequence used for RNAi not stated by authors, spliced coding region sequence of F28H6.1a used for curation. | |||||
Exact sequence used for RNAi not stated by authors, spliced coding region sequence of W10G6.2a used for curation. | |||||
Method | RNAi |