WormBase Tree Display for Strain: WBStrain00039809
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WBStrain00039809 | Status | Live | ||
---|---|---|---|---|
Genotype | Whole-genome sequenced strain. | |||
Public_name | VC40842 | |||
Contains | Gene | WBGene00002150 | ||
WBGene00012089 | ||||
Variation (658) | ||||
Properties | Outcrossed | x0 | ||
Mutagen | EMS+ENU | |||
CGC_received | 21 Mar 2012 00:00:00 | |||
05 Nov 2019 00:00:00 | ||||
Location | CGC | |||
Remark | This strain was provided by the C. elegans Reverse Genetics Core Facility at the University of British Columbia, which is part of the international C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. | Paper_evidence | WBPaper00042537 | |
Million Mutation Project strain. This strain was isolated after EMS+ENU mutagenesis of VC2010, propagated clonally through F10 to drive mutations to homozygosity, and subjected to whole-genome sequencing. It is homozygous for a large number of mutations determined from sequence data. It may also carry large copy number variations that are not homozygous. Alleles numbered between gk100000 and gk962522 are homozygous; those numbered from gk962523 up should be assumed to be non-homozygous. A graphical representation of these large copy number differences can be seen in the Plot section for each strain on the MMP web site ( URL: genome.sfu.ca/mmp/). | Inferred_automatically | From CGC strain data | ||
Made_by: Vancouver KO Group | CGC_data_submission | |||
Homozygous viable. Nonsense and splicing alleles identified by amplicon sequencing. The gk5171 mutation is G->A, flanking sequences CTCTGATAATAAAACATTTGTAAAGTGTTC and AATGATATTTTTCGTTGCAGATTGTTTTTT. The gk5172 mutation is T->C, flanking sequences GACGCTTTCCACCACTCCTTCCAAAATTGC and GAAAATTTGAAAACATTTGGATTTTCTATT. | Inferred_automatically | From CGC strain data | ||
Species | Caenorhabditis elegans |