WormBase Tree Display for Variation: WBVar00000460

WBVar00000460 Evidence: Paper_evidence: WBPaper00048626
  Name: Public_name: bn2
    Other_name: CE24685:p.Gly296Asp
      Y87G2A.5.1:c.887G>A
    HGVSg: CHROMOSOME_I:g.13556729C>T
  Sequence_details: SMap: S_parent: Sequence: Y87G2A
    Flanking_sequences: tgcccggatacgataaaaaaatcgaattcg cgtgctcaactcgttcgcctacaagattca
    Mapping_target: Y87G2A
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00048626
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000261
      WBStrain00030635
      WBStrain00030636
      WBStrain00034434
      WBStrain00056203
      WBStrain00056208
      WBStrain00056254
    Component_of_genotype: WBGenotype00000069
      WBGenotype00000159
    Laboratory: SS
      SJZ
    Status: Live
  Linked_to: WBVar02144875
    WBVar02144876
    WBVar02144874
  Affects: Gene: WBGene00006936
    Transcript: Y87G2A.5.1 (12)
    Interactor (18)
  Genetics: Gene_class: glp
    Interpolated_map_position: I 21.4559
    Mapping_data: In_2_point: 6106
        6107
      In_multi_point: 2176
        2177
        3241
        3242
        3380
        3429
      In_pos_neg_data: 6688
        6689
        6690
        6691
        6692
        6693
        6694
  Description: Phenotype (19)
    Phenotype_not_observed: WBPhenotype:0001182 Paper_evidence: WBPaper00032310
        Curator_confirmed: WBPerson2987
        Remark: glp-4(bn2ts) mutants exhibited normal fat content at the permissive temperature of 15 degrees Celsius, compared to wild type controls, as determined by Nile Red staining (Figure S3C,D) Paper_evidence: WBPaper00032310
            Curator_confirmed: WBPerson2987
        Phenotype_assay: Temperature: 15 Paper_evidence: WBPaper00032310
              Curator_confirmed: WBPerson2987
      WBPhenotype:0001266 Paper_evidence: WBPaper00035490
        Curator_confirmed: WBPerson2021
        Remark: Nematodes containing a mutation in either glp-1 or glp-4 did not have substantially more phospho-PMK-1 than did wild-type nematodes Paper_evidence: WBPaper00035490
            Curator_confirmed: WBPerson2021
      WBPhenotype:0001426 Paper_evidence: WBPaper00004883
        Curator_confirmed: WBPerson712
        Temperature_sensitive: Heat_sensitive: Paper_evidence: WBPaper00004883
              Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: arIs37 Paper_evidence: WBPaper00004883
              Curator_confirmed: WBPerson712
      WBPhenotype:0002534 Paper_evidence: WBPaper00005130
        Curator_confirmed: WBPerson712
        Remark: The accumulation of both abf-1 and abf-2 transcripts was almost identical in adults of N2 and glp-4(bn2), and the eggs. Paper_evidence: WBPaper00005130
            Curator_confirmed: WBPerson712
  Reference: WBPaper00021869
    WBPaper00040043
    WBPaper00035664
    WBPaper00031961
    WBPaper00005597
    WBPaper00005130
    WBPaper00004137
    WBPaper00004883
    WBPaper00021744
    WBPaper00025898
    WBPaper00026318
    WBPaper00032310
    WBPaper00035490
    WBPaper00031962
    WBPaper00035324
    WBPaper00015009
    WBPaper00028527
    WBPaper00014490
    WBPaper00003744
    WBPaper00027619
    WBPaper00013937
    WBPaper00015669
    WBPaper00020975
    WBPaper00035486
    WBPaper00015000
    WBPaper00014911
    WBPaper00021019
    WBPaper00021790
    WBPaper00010872
    WBPaper00012526
    WBPaper00019077
    WBPaper00048626
    WBPaper00050044
    WBPaper00065793
    WBPaper00065768
    WBPaper00064734
  Method: Substitution_allele