WormBase Tree Display for Variation: WBVar00000480
expand all nodes | collapse all nodes | view schema
WBVar00000480 | Evidence | Paper_evidence | WBPaper00028483 | ||||||
---|---|---|---|---|---|---|---|---|---|
Name | Public_name | bn67 | |||||||
Other_name | CE27781:p.His206Tyr | ||||||||
Y2H9A.1.1:c.616C>T | |||||||||
HGVSg | CHROMOSOME_V:g.13436749G>A | ||||||||
Sequence_details | SMap | S_parent | Sequence | Y2H9A | |||||
Flanking_sequences | gaatgccaagcaagacttctgtgccctctt | attgctgcaatagttgcaatttggaccatc | |||||||
Mapping_target | Y2H9A | ||||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00028483 | ||||
SeqStatus | Sequenced | ||||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Strain | WBStrain00022581 | ||||||||
Laboratory | SS | ||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00003222 | |||||||
Transcript | Y2H9A.1.1 (12) | ||||||||
Interactor | WBInteraction000050760 | ||||||||
WBInteraction000050872 | |||||||||
WBInteraction000050880 | |||||||||
WBInteraction000050887 | |||||||||
WBInteraction000554888 | |||||||||
WBInteraction000554892 | |||||||||
Genetics | Interpolated_map_position | V | 5.34443 | ||||||
Mapping_data | In_multi_point | 2160 | |||||||
Description | Phenotype | WBPhenotype:0000154 | Paper_evidence | WBPaper00001477 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | Homozygous mothers have a reduced average brood size compared to wild-type controls | Paper_evidence | WBPaper00001477 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001477 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Life_stage | WBls:0000057 | PATO:0000460 | Paper_evidence | WBPaper00001477 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Temperature | 16 C , 25 C | Paper_evidence | WBPaper00001477 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0000684 | Paper_evidence | WBPaper00001477 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | Mutant progeny exhibit abnormal germline proliferation during development and fail to form mature gametes | Paper_evidence | WBPaper00001477 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001477 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Life_stage | WBls:0000057 | PATO:0000460 | Paper_evidence | WBPaper00001477 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
Maternal | Strictly_maternal | Paper_evidence | WBPaper00001477 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0001504 | Paper_evidence | WBPaper00001477 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | Mes phenotype is not due to abnormalities in P granule staining | Paper_evidence | WBPaper00001477 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Penetrance | Complete | Paper_evidence | WBPaper00001477 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Range | 100 | 100 | Paper_evidence | WBPaper00001477 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001477 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Life_stage | WBls:0000057 | PATO:0000460 | Paper_evidence | WBPaper00001477 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
Maternal | Strictly_maternal | Paper_evidence | WBPaper00001477 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Temperature | 16 C , 25 C | Paper_evidence | WBPaper00001477 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_not_observed | WBPhenotype:0000052 | Paper_evidence | WBPaper00001477 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00001477 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Reference | WBPaper00001477 | ||||||||
Method | Substitution_allele |