WormBase Tree Display for Variation: WBVar00000658
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| WBVar00000658 | Evidence | Paper_evidence | WBPaper00030901 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | bz34 | ||||
| Other_name | K08F4.4.1:c.568+15_1275del | |||||
| HGVSg | CHROMOSOME_IV:g.10131147_10132769del | |||||
| Sequence_details | SMap | S_parent | Sequence | K08F4 | ||
| Flanking_sequences | gaaatgaatgttctaggtttgataaagaat | gtcaatgttcttggagacagtttcggtgca | ||||
| Mapping_target | K08F4 | |||||
| Type_of_mutation | Deletion | tcataacgacctagaatcaatcatctttttaggattgatcgtgttttgcagtggatttggaataattctgagtattctgggagatcaagcacgtcttatgataaactttttcattgttctcgacgctattattatgcgttggattagtgcgctcatgtggtgagtagtgaaattatttgatgacgtcaagactgtacattttgcaaagtgaaatgttttataaatgtggggaaattgtggaaaacaaagttcctaatcatgcaccatgatatctgtccgcgatcttaccgtaagcaaccgcacttaaaaagatggaaactgcgaaatatcaggcgcgtcactggaagttgtgttgaccgcaatgccaattttcatatttatactgtacattttgcaaatttatacgaacaaaggctcatgcgaagtattttgttgtataaatgcagagcatgcgcctttgaaattactgtaggaatcgcaaagtgtgttcttttaatatcttttctctggtttggatcttaattttcgaggtgtttgggatttaaacactaattagcgagaaagaaactttcgaaaaagagtgcataaaactgcctacagtaatcttaatggcgaatatgcatcaattttctcgaaaacgcacatcccgtggcgagacctttccgcaaagatagacttcccttgaagtttgcaagcgaagattttgaaatgattgaagattttcataaacatgcatgggactttctgtaatgttcggcacaccagcaatacaattttcaggtgttatccaattggaatattatcacttgtctgtaaaaatatcattgatatcgataatctaacagaaactgcacaagctcttgccatgtatgtagttactgtaatctgtggtcttatgatccattcactactcactcttccacttttatattttcttgtcaccaaaaaatcgccatttgccttcatgactggaatgcttcaagcacttgcaactgcttttggaacagcatcatccggagccacgttgccagtaacattccgtgcgctggaagaaaatttgaaaatagatcgaagagtgactcgatttgtactgccacttggtgccacaattacaatggacggaacagcactttatgaggctgtggctgttattttcattgctcaattacataatattaaattaagtttgatggatttagtgacaatcagtatcacaactacagttgcttcaattggttctggatcagttccagctggtttagacacaattgttattgtattgacaactgttggattaccggcaaaggatcttagtttgttgcttacagttgattggttactgtaagttttatgagaaaatacttcaaattgaattcaaaactttcagtccaagttttggcaaattgccaaaattttcaaaattttagaaaaccttcgagctgctcgctgccactgtttgacagtaacaaaatgtcaaactttttgaaaagttttactgttttgcaattctcgcaccatagtaccacctgtaaaaaagcttaattttacctgaagtattacgaaagtgcatgtgacgccaaataatttaattgaaatactttcagtgatcgcatccggacgtct | Paper_evidence | WBPaper00030901 | ||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain (12) | ||||||
| Laboratory | ZB | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00001621 | ||||
| Transcript | K08F4.4.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | |||||
| HGVSc | K08F4.4.1:c.568+15_1275del | |||||
| cDNA_position | ?-1414 | |||||
| CDS_position | ?-1275 | |||||
| Protein_position | ?-425 | |||||
| Intron_number | 5-7/9 | |||||
| Exon_number | 6-8/10 | |||||
| Interactor | WBInteraction000578893 | |||||
| WBInteraction000578894 | ||||||
| WBInteraction000578896 | ||||||
| WBInteraction000578897 | ||||||
| WBInteraction000578898 | ||||||
| WBInteraction000578899 | ||||||
| WBInteraction000578900 | ||||||
| Genetics | Interpolated_map_position | IV | 4.53191 | |||
| Disease_info | Models_disease | DOID:1289 | ||||
| Models_disease_in_annotation | WBDOannot00000528 | |||||
| Reference | WBPaper00030901 | |||||
| Method | Deletion_allele |
