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WormBase Tree Display for Variation: WBVar00001813

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Name Class

WBVar00001813NamePublic_nameWBVar00001813
Other_namehaw31485
cewivar00187436
Y46G5A.1a.1:c.1160+556T>A
Y46G5A.1d.1:c.1160+556T>A
Y46G5A.1b.1:c.1160+556T>A
HGVSgCHROMOSOME_II:g.12699620T>A
Sequence_detailsSMapS_parentSequenceY46G5A
Flanking_sequencesaatgttccgataaaaaattttaattaaaaaaaattgaaattgaagccata
Mapping_targetY46G5A
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00012894
TranscriptY46G5A.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46G5A.1b.1:c.1160+556T>A
Intron_number5/16
Y46G5A.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46G5A.1a.1:c.1160+556T>A
Intron_number6/17
Y46G5A.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46G5A.1d.1:c.1160+556T>A
Intron_number5/7
Remark[20081124 db] this Variation was previously named hw31485
MethodWGS_Hawaiian_Waterston