WormBase Tree Display for Variation: WBVar00001993

WBVar00001993 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00001993
    Other_name: haw31521
      cewivar00187465
      Y46G5A.1c.1:c.1748-39A>T
      Y46G5A.1b.1:c.2636-39A>T
      Y46G5A.1a.1:c.2636-39A>T
    HGVSg: CHROMOSOME_II:g.12721061A>T
  Sequence_details: SMap: S_parent: Sequence: Y46G5A
    Flanking_sequences: tttctaatatattattactgttgaa aataaataaatatttttttttattc
    Mapping_target: Y46G5A
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01380187
    Status: Live
  Affects: Gene: WBGene00012894
    Transcript: Y46G5A.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y46G5A.1b.1:c.2636-39A>T
        Intron_number: 12/16
      Y46G5A.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y46G5A.1a.1:c.2636-39A>T
        Intron_number: 13/17
      Y46G5A.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y46G5A.1c.1:c.1748-39A>T
        Intron_number: 7/11
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw31521
  Method: WGS_Hawaiian_Waterston