WormBase Tree Display for Variation: WBVar00002010
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| WBVar00002010 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00002010 | |||
| Other_name | haw81500 | ||||
| haw169331 | |||||
| cewivar00240984 | |||||
| C32C4.2a.1:c.35C>T | |||||
| C32C4.2b.1:c.170C>T | |||||
| C32C4.2c.1:c.176C>T | |||||
| CE44791:p.Ser57Phe | |||||
| CE05345:p.Ser12Phe | |||||
| CE47018:p.Ser59Phe | |||||
| HGVSg | CHROMOSOME_V:g.10650768C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C32C4 | |
| Flanking_sequences | gatgagaaggactacacaatttatt | taaatgcgcagctgagtttattgca | |||
| Mapping_target | C32C4 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00589196 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00000174 | |||
| Transcript | C32C4.2b.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | C32C4.2b.1:c.170C>T | ||||
| HGVSp | CE44791:p.Ser57Phe | ||||
| cDNA_position | 170 | ||||
| CDS_position | 170 | ||||
| Protein_position | 57 | ||||
| Exon_number | 2/7 | ||||
| Codon_change | tCt/tTt | ||||
| Amino_acid_change | S/F | ||||
| C32C4.2c.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | C32C4.2c.1:c.176C>T | ||||
| HGVSp | CE47018:p.Ser59Phe | ||||
| cDNA_position | 203 | ||||
| CDS_position | 176 | ||||
| Protein_position | 59 | ||||
| Exon_number | 3/8 | ||||
| Codon_change | tCt/tTt | ||||
| Amino_acid_change | S/F | ||||
| C32C4.2a.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | C32C4.2a.1:c.35C>T | ||||
| HGVSp | CE05345:p.Ser12Phe | ||||
| cDNA_position | 35 | ||||
| CDS_position | 35 | ||||
| Protein_position | 12 | ||||
| Exon_number | 1/6 | ||||
| Codon_change | tCt/tTt | ||||
| Amino_acid_change | S/F | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw81500 | ||||
| Method | WGS_Hawaiian_Waterston |
