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WormBase Tree Display for Variation: WBVar00002018

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Name Class

WBVar00002018NamePublic_nameWBVar00002018
Other_namehaw31526
cewivar00510313
Y46G5A.1b.1:c.2803-239C>A
Y46G5A.1c.1:c.1915-239C>A
Y46G5A.1a.1:c.2803-239C>A
HGVSgCHROMOSOME_II:g.12721577C>A
Sequence_detailsSMapS_parentSequenceY46G5A
Flanking_sequencesttgatttttttcaaaaatattttttaaaatttccaaaaaaaatcattttc
Mapping_targetY46G5A
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00012894
TranscriptY46G5A.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46G5A.1b.1:c.2803-239C>A
Intron_number13/16
Y46G5A.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46G5A.1a.1:c.2803-239C>A
Intron_number14/17
Y46G5A.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46G5A.1c.1:c.1915-239C>A
Intron_number8/11
Remark[20081124 db] this Variation was previously named hw31526
MethodWGS_Hawaiian_Waterston