WormBase Tree Display for Variation: WBVar00002028

WBVar00002028 Name: Public_name: WBVar00002028
    Other_name: haw31528
      haw134930
      cewivar00015692
      Y46G5A.1a.1:c.2969+125C>T
      Y46G5A.1c.1:c.2081+125C>T
      Y46G5A.1b.1:c.2902+192C>T
    HGVSg: CHROMOSOME_II:g.12722107C>T
  Sequence_details: SMap: S_parent: Sequence: Y46G5A
    Flanking_sequences: aaatttggtttaaaaatactcaaaa actctgaaattcaaaaattccactaaaaaaacttt
    Mapping_target: Y46G5A
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (25)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00554795
        WBVar01315232
        WBVar01380195
        WBVar01248737
    Status: Live
  Affects: Gene: WBGene00012894
    Transcript: Y46G5A.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y46G5A.1b.1:c.2902+192C>T
        Intron_number: 14/16
      Y46G5A.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y46G5A.1a.1:c.2969+125C>T
        Intron_number: 15/17
      Y46G5A.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y46G5A.1c.1:c.2081+125C>T
        Intron_number: 9/11
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw31528
  Method: WGS_Hawaiian_Waterston