WormBase Tree Display for Variation: WBVar00002200

WBVar00002200 Name: Public_name: WBVar00002200
    Other_name: uCE5-1838
      haw81538
      haw169356
      cewivar00241027
      T28B11.1a.1:c.1430+17G>A
      T28B11.1b.1:c.1319+17G>A
      T28B11.1a.2:c.1430+17G>A
    HGVSg: CHROMOSOME_V:g.10713543C>T
  Sequence_details: SMap: S_parent: Sequence: T28B11
    Flanking_sequences: aaaatgttacataattatttgaaag tgaaaattccactcaccttgatggc
    Mapping_target: T28B11
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (13)
    Laboratory: RW
      QX
    Person: WBPerson1562
      WBPerson4037
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
      SNP_Swan
      WGS_Andersen
    History: Acquires_merge: WBVar01461563
        WBVar00272453
        WBVar00589221
    Status: Live
  Affects: Gene: WBGene00012117
    Transcript: T28B11.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28B11.1a.1:c.1430+17G>A
        Intron_number: 3/5
      T28B11.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28B11.1b.1:c.1319+17G>A
        Intron_number: 1/2
      T28B11.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T28B11.1a.2:c.1430+17G>A
        Intron_number: 4/6
  Reference: WBPaper00038208
    WBPaper00040707
    WBPaper00005369
  Remark: [20081124 db] this Variation was previously named hw81538
  Method: WGS_Hawaiian_Waterston