WormBase Tree Display for Variation: WBVar00002205
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WBVar00002205 | Name | Public_name | WBVar00002205 | ||
---|---|---|---|---|---|
Other_name | haw81539 | ||||
cewivar00241029 | |||||
CE47990:p.Leu156= | |||||
CE14335:p.Leu193= | |||||
T28B11.1b.1:c.468G>C | |||||
T28B11.1a.2:c.579G>C | |||||
T28B11.1a.1:c.579G>C | |||||
HGVSg | CHROMOSOME_V:g.10714411C>G | ||||
Sequence_details | SMap | S_parent | Sequence | T28B11 | |
Flanking_sequences | agacatcattcacatcatactcttg | agccattcatcgaagtggaatgcaa | |||
Mapping_target | T28B11 | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00012117 | |||
Transcript | T28B11.1a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T28B11.1a.1:c.579G>C | ||||
HGVSp | CE14335:p.Leu193= | ||||
cDNA_position | 628 | ||||
CDS_position | 579 | ||||
Protein_position | 193 | ||||
Exon_number | 3/6 | ||||
Codon_change | ctG/ctC | ||||
Amino_acid_change | L | ||||
T28B11.1b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T28B11.1b.1:c.468G>C | ||||
HGVSp | CE47990:p.Leu156= | ||||
cDNA_position | 468 | ||||
CDS_position | 468 | ||||
Protein_position | 156 | ||||
Exon_number | 1/3 | ||||
Codon_change | ctG/ctC | ||||
Amino_acid_change | L | ||||
T28B11.1a.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T28B11.1a.2:c.579G>C | ||||
HGVSp | CE14335:p.Leu193= | ||||
cDNA_position | 711 | ||||
CDS_position | 579 | ||||
Protein_position | 193 | ||||
Exon_number | 4/7 | ||||
Codon_change | ctG/ctC | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw81539 | ||||
Method | WGS_Hawaiian_Waterston |