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WormBase Tree Display for Variation: WBVar00002205

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Name Class

WBVar00002205NamePublic_nameWBVar00002205
Other_namehaw81539
cewivar00241029
CE47990:p.Leu156=
CE14335:p.Leu193=
T28B11.1b.1:c.468G>C
T28B11.1a.2:c.579G>C
T28B11.1a.1:c.579G>C
HGVSgCHROMOSOME_V:g.10714411C>G
Sequence_detailsSMapS_parentSequenceT28B11
Flanking_sequencesagacatcattcacatcatactcttgagccattcatcgaagtggaatgcaa
Mapping_targetT28B11
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00012117
TranscriptT28B11.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScT28B11.1a.1:c.579G>C
HGVSpCE14335:p.Leu193=
cDNA_position628
CDS_position579
Protein_position193
Exon_number3/6
Codon_changectG/ctC
Amino_acid_changeL
T28B11.1b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScT28B11.1b.1:c.468G>C
HGVSpCE47990:p.Leu156=
cDNA_position468
CDS_position468
Protein_position156
Exon_number1/3
Codon_changectG/ctC
Amino_acid_changeL
T28B11.1a.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScT28B11.1a.2:c.579G>C
HGVSpCE14335:p.Leu193=
cDNA_position711
CDS_position579
Protein_position193
Exon_number4/7
Codon_changectG/ctC
Amino_acid_changeL
Remark[20081124 db] this Variation was previously named hw81539
MethodWGS_Hawaiian_Waterston