WormBase Tree Display for Variation: WBVar00003753
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| WBVar00003753 | Name | Public_name | WBVar00003753 | ||
|---|---|---|---|---|---|
| Other_name | pas11521 | ||||
| haw31873 | |||||
| haw135237 | |||||
| cewivar00016761 | |||||
| F42G4.3a.1:c.1068G>A | |||||
| CE46595:p.Val90= | |||||
| CE46698:p.Val356= | |||||
| F42G4.3c.1:c.270G>A | |||||
| F42G4.3e.1:c.1068G>A | |||||
| CE23716:p.Val356= | |||||
| HGVSg | CHROMOSOME_II:g.13064921G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F42G4 | |
| Flanking_sequences | acggcgatgaggtggatcatctggt | catcagatgagaacaaagctgaatc | |||
| Mapping_target | F42G4 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (33) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar01249245 | |||
| WBVar01380785 | |||||
| WBVar00555102 | |||||
| WBVar00106662 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006999 | |||
| Transcript | F42G4.3e.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F42G4.3e.1:c.1068G>A | ||||
| HGVSp | CE46698:p.Val356= | ||||
| cDNA_position | 1068 | ||||
| CDS_position | 1068 | ||||
| Protein_position | 356 | ||||
| Exon_number | 6/10 | ||||
| Codon_change | gtG/gtA | ||||
| Amino_acid_change | V | ||||
| F42G4.3c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F42G4.3c.1:c.270G>A | ||||
| HGVSp | CE46595:p.Val90= | ||||
| cDNA_position | 270 | ||||
| CDS_position | 270 | ||||
| Protein_position | 90 | ||||
| Exon_number | 2/6 | ||||
| Codon_change | gtG/gtA | ||||
| Amino_acid_change | V | ||||
| F42G4.3a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F42G4.3a.1:c.1068G>A | ||||
| HGVSp | CE23716:p.Val356= | ||||
| cDNA_position | 1068 | ||||
| CDS_position | 1068 | ||||
| Protein_position | 356 | ||||
| Exon_number | 6/11 | ||||
| Codon_change | gtG/gtA | ||||
| Amino_acid_change | V | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw31873 | ||||
| Method | WGS_Hawaiian_Waterston |
