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WormBase Tree Display for Variation: WBVar00003895

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Name Class

WBVar00003895EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00003895
Other_namehaw81877
haw169573
cewivar00241445
CE06455:p.Pro227Ser
T19B10.1.1:c.679C>T
HGVSgCHROMOSOME_V:g.11218700C>T
Sequence_detailsSMapS_parentSequenceT19B10
Flanking_sequencesaattggagttttagtttcatttaatctcacctgaagaatcaattcatttt
Mapping_targetT19B10
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00589438
StatusLive
AffectsGeneWBGene00011830
TranscriptT19B10.1.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScT19B10.1.1:c.679C>T
HGVSpCE06455:p.Pro227Ser
cDNA_position837
CDS_position679
Protein_position227
Exon_number5/7
Codon_changeCct/Tct
Amino_acid_changeP/S
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw81877
MethodWGS_Hawaiian_Waterston