WormBase Tree Display for Variation: WBVar00003895
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WBVar00003895 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00003895 | |||
Other_name | haw81877 | ||||
haw169573 | |||||
cewivar00241445 | |||||
CE06455:p.Pro227Ser | |||||
T19B10.1.1:c.679C>T | |||||
HGVSg | CHROMOSOME_V:g.11218700C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T19B10 | |
Flanking_sequences | aattggagttttagtttcatttaat | ctcacctgaagaatcaattcatttt | |||
Mapping_target | T19B10 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00589438 | |||
Status | Live | ||||
Affects | Gene | WBGene00011830 | |||
Transcript | T19B10.1.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | T19B10.1.1:c.679C>T | ||||
HGVSp | CE06455:p.Pro227Ser | ||||
cDNA_position | 837 | ||||
CDS_position | 679 | ||||
Protein_position | 227 | ||||
Exon_number | 5/7 | ||||
Codon_change | Cct/Tct | ||||
Amino_acid_change | P/S | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw81877 | ||||
Method | WGS_Hawaiian_Waterston |