Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00004003

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00004003NamePublic_nameWBVar00004003
Other_namepas42679
snp_F29C12[2]
haw31923
haw135276
cewivar00016827
F29C12.3a.1:c.3532-107T>C
F29C12.3b.1:c.3538-107T>C
F29C12.3c.1:c.1102-107T>C
HGVSgCHROMOSOME_II:g.13103019A>G
Sequence_detailsSMapS_parentSequenceF29C12
Flanking_sequencesgtaaaaaatagtcgaaaaaaaattcaaaaatgccgaaaattacaaaaaaa
Mapping_targetF29C12
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (22)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Wicks
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar01249313
WBVar01315862
WBVar00555141
WBVar01380865
WBVar00244463
WBVar00230903
StatusLive
AffectsGeneWBGene00009245
TranscriptF29C12.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF29C12.3b.1:c.3538-107T>C
Intron_number12/17
F29C12.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF29C12.3c.1:c.1102-107T>C
Intron_number2/6
F29C12.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF29C12.3a.1:c.3532-107T>C
Intron_number12/17
ReferenceWBPaper00038208
WBPaper00004703
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw31923
MethodWGS_Hawaiian_Waterston