WormBase Tree Display for Variation: WBVar00004025
expand all nodes | collapse all nodes | view schema
WBVar00004025 | Name | Public_name | WBVar00004025 | ||
---|---|---|---|---|---|
Other_name | haw81903 | ||||
cewivar00241473 | |||||
CE09198:p.Leu69= | |||||
F07B10.1b.1:c.96C>T | |||||
CE46158:p.Leu32= | |||||
F07B10.1a.1:c.207C>T | |||||
HGVSg | CHROMOSOME_V:g.11265312G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F07B10 | |
Flanking_sequences | caagtgctggaaggttatcagctag | agaacagctcccgttgaaattgatt | |||
Mapping_target | F07B10 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00000539 | |||
Transcript | F07B10.1b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F07B10.1b.1:c.96C>T | ||||
HGVSp | CE46158:p.Leu32= | ||||
cDNA_position | 240 | ||||
CDS_position | 96 | ||||
Protein_position | 32 | ||||
Exon_number | 4/9 | ||||
Codon_change | ctC/ctT | ||||
Amino_acid_change | L | ||||
F07B10.1a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F07B10.1a.1:c.207C>T | ||||
HGVSp | CE09198:p.Leu69= | ||||
cDNA_position | 245 | ||||
CDS_position | 207 | ||||
Protein_position | 69 | ||||
Exon_number | 4/9 | ||||
Codon_change | ctC/ctT | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw81903 | ||||
Method | WGS_Hawaiian_Waterston |