WormBase Tree Display for Variation: WBVar00005446
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| WBVar00005446 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00005446 | |||
| Other_name | pas12686 | ||||
| haw37172 | |||||
| cewivar00017403 | |||||
| F30H5.1.1:c.2177-26T>A | |||||
| HGVSg | CHROMOSOME_III:g.499246T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F30H5 | |
| Flanking_sequences | gctatatatttagcatacccaactttggtctgctaattatttagcatacccaactttggtctgctaaatatttagcatacccatttttggtctgctaaatattcaaatatggtctgctaaattatttttaaatttttccaatttttagaaaaataattcaaaaatacggcaattttcattcctacgtgaaatgaagtcgaaattatcgttttaacaaaataaaaattggaaaaaatagtcttaaaatgaacattttcagatttttgatacattttagcttgaaagaaaaggattttaaaa | ataaatacaatattcaaatttccaggacaacgagcatacgaagtggtaaaaccgctttgcgacctgctccatccggacgttgaaggaaaagccaactacgattctcttctgacactcaccaacttggcaagcgtcagtgattcgattcgtggacgaattttgaaagagaaggcaattccaaagattgaggaattctggtttatgacggatcacgagcatttgagagccgccgccgctgagcttcttctcaatttgctctttttcgagaagttttatgaggaaactgttgcggtaagtgtg | |||
| Mapping_target | F30H5 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (33) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00030248 | |||
| WBVar01389127 | |||||
| WBVar01254616 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006781 | |||
| Transcript | F30H5.1.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F30H5.1.1:c.2177-26T>A | ||||
| Intron_number | 9/12 | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
