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WormBase Tree Display for Variation: WBVar00005528

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Name Class

WBVar00005528NamePublic_nameWBVar00005528
Other_namehaw32228
haw135516
cewivar00187915
Y48C3A.4b.1:c.93+517C>A
Y48C3A.5d.1:c.504+5414G>T
Y48C3A.5a.1:c.639+5414G>T
Y48C3A.4a.1:c.84+517C>A
Y48C3A.5b.1:c.639+5414G>T
HGVSgCHROMOSOME_II:g.13285182G>T
Sequence_detailsSMapS_parentSequenceY48C3A
Flanking_sequencesgtgcctaccatatctaaagcattttctcaactttggcgacttatatctcg
Mapping_targetY48C3A
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00555381
WBVar01381380
StatusLive
AffectsGeneWBGene00012989
WBGene00012988
TranscriptY48C3A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5d.1:c.504+5414G>T
Intron_number4/9
Y48C3A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.4b.1:c.93+517C>A
Intron_number2/6
Y48C3A.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5b.1:c.639+5414G>T
Intron_number4/11
Y48C3A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5a.1:c.639+5414G>T
Intron_number4/10
Y48C3A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.4a.1:c.84+517C>A
Intron_number2/6
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw32228
MethodWGS_Hawaiian_Waterston