WormBase Tree Display for Variation: WBVar00005733
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WBVar00005733 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00005733 | |||
Other_name | haw32269 | ||||
cewivar00187941 | |||||
Y48C3A.8a.1:c.1309-283C>T | |||||
Y48C3A.8b.1:c.697-283C>T | |||||
HGVSg | CHROMOSOME_II:g.13322879G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y48C3A | |
Flanking_sequences | ttacagattttttgccgttttttct | ttaaaattccggaaatttacagttt | |||
Mapping_target | Y48C3A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01381442 | |||
Status | Live | ||||
Affects | Gene | WBGene00012990 | |||
Transcript | Y48C3A.8b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y48C3A.8b.1:c.697-283C>T | ||||
Intron_number | 1/1 | ||||
Y48C3A.8a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48C3A.8a.1:c.1309-283C>T | ||||
Intron_number | 5/6 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw32269 | ||||
Method | WGS_Hawaiian_Waterston |