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WormBase Tree Display for Variation: WBVar00006135

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Name Class

WBVar00006135EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00006135
Other_namehaw82325
haw169852
cewivar00241959
C52E4.2c.1:c.123+198T>C
C52E4.2a.2:c.60+198T>C
C52E4.2a.1:c.60+198T>C
HGVSgCHROMOSOME_V:g.11977989A>G
Sequence_detailsSMapS_parentSequenceC52E4
Flanking_sequencesgtgagaaaaactatataaaatctttagaattctgcagaaactcgagtata
Mapping_targetC52E4
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00589717
StatusLive
AffectsGeneWBGene00003235
TranscriptC52E4.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52E4.2a.1:c.60+198T>C
Intron_number3/7
C52E4.2a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52E4.2a.2:c.60+198T>C
Intron_number2/6
C52E4.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC52E4.2c.1:c.123+198T>C
Intron_number2/5
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw82325
MethodWGS_Hawaiian_Waterston