WormBase Tree Display for Variation: WBVar00006400
expand all nodes | collapse all nodes | view schema
WBVar00006400 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00006400 | |||
Other_name | haw82378 | ||||
haw169891 | |||||
cewivar00242023 | |||||
CE09308:p.Gly398= | |||||
F10C2.4.1:c.1194C>A | |||||
HGVSg | CHROMOSOME_V:g.12043018C>A | ||||
Sequence_details | SMap | S_parent | Sequence | F10C2 | |
Flanking_sequences | atcttggtcgtcagaaagaaaaagg | tcagttgtaagagatgctgcaatat | |||
Mapping_target | F10C2 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00589756 | |||
Status | Live | ||||
Affects | Gene | WBGene00008645 | |||
Transcript | F10C2.4.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F10C2.4.1:c.1194C>A | ||||
HGVSp | CE09308:p.Gly398= | ||||
cDNA_position | 1248 | ||||
CDS_position | 1194 | ||||
Protein_position | 398 | ||||
Exon_number | 6/10 | ||||
Codon_change | ggC/ggA | ||||
Amino_acid_change | G | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw82378 | ||||
Method | WGS_Hawaiian_Waterston |