WormBase Tree Display for Variation: WBVar00006415
expand all nodes | collapse all nodes | view schema
WBVar00006415 | Name | Public_name | WBVar00006415 | ||
---|---|---|---|---|---|
Other_name | haw82381 | ||||
haw169892 | |||||
cewivar00242027 | |||||
F10C2.5.1:c.333A>G | |||||
CE09309:p.Lys111= | |||||
HGVSg | CHROMOSOME_V:g.12045764A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F10C2 | |
Flanking_sequences | gagcagtgtcacttgttcttgagaa | gctcgtgatgatgctaatgtgaatg | |||
Mapping_target | F10C2 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
WBStrain00005299 | From_analysis | WGS_Andersen | |||
WBStrain00005300 | From_analysis | WGS_Andersen | |||
WBStrain00005307 | From_analysis | WGS_Andersen | |||
WBStrain00005310 | From_analysis | WGS_Andersen | |||
WBStrain00005835 | From_analysis | WGS_Andersen | |||
WBStrain00023279 | From_analysis | WGS_Andersen | |||
WBStrain00030851 | From_analysis | WGS_Andersen | |||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar00589757 | |||
WBVar01461967 | |||||
Status | Live | ||||
Affects | Gene | WBGene00008646 | |||
Transcript | F10C2.5.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F10C2.5.1:c.333A>G | ||||
HGVSp | CE09309:p.Lys111= | ||||
cDNA_position | 333 | ||||
CDS_position | 333 | ||||
Protein_position | 111 | ||||
Exon_number | 1/7 | ||||
Codon_change | aaA/aaG | ||||
Amino_acid_change | K | ||||
Reference | WBPaper00038208 | ||||
WBPaper00040707 | |||||
Remark | [20081124 db] this Variation was previously named hw82381 | ||||
Method | WGS_Hawaiian_Waterston |