WormBase Tree Display for Variation: WBVar00006583
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WBVar00006583 | Name | Public_name | WBVar00006583 | ||
---|---|---|---|---|---|
Other_name | haw32439 | ||||
Y48C3A.14b.1:c.235-240A>T | |||||
Y48C3A.14a.1:c.1750-240A>T | |||||
Y48C3A.14c.1:c.1342-240A>T | |||||
HGVSg | CHROMOSOME_II:g.13396867A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y48C3A | |
Flanking_sequences | atccaaaatattctcattttttaaa | tttttttgggcgaaaaaaaatcaaa | |||
Mapping_target | Y48C3A | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00012995 | |||
Transcript | Y48C3A.14b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y48C3A.14b.1:c.235-240A>T | ||||
Intron_number | 1/4 | ||||
Y48C3A.14a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48C3A.14a.1:c.1750-240A>T | ||||
Intron_number | 6/10 | ||||
Y48C3A.14c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48C3A.14c.1:c.1342-240A>T | ||||
Intron_number | 4/7 | ||||
Remark | [20081124 db] this Variation was previously named hw32439 | ||||
Method | WGS_Hawaiian_Waterston |