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WormBase Tree Display for Variation: WBVar00008018

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Name Class

WBVar00008018NamePublic_nameWBVar00008018
Other_namepas11487
haw32726
haw135883
Y48E1B.2a.1:c.1341+278T>C
Y48E1B.2b.1:c.144+278T>C
HGVSgCHROMOSOME_II:g.13536502A>G
Sequence_detailsSMapS_parentSequenceY48E1B
Flanking_sequencesatgcggatttttaacgctttttgagggaaaatctcaaaattattcaattt
Mapping_targetY48E1B
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
WBStrain00006642From_analysisWGS_De_Bono
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar01382143
WBVar01250534
WBVar00555748
WBVar00106628
StatusLive
AffectsGeneWBGene00013001
TranscriptY48E1B.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48E1B.2b.1:c.144+278T>C
Intron_number4/5
Y48E1B.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48E1B.2a.1:c.1341+278T>C
Intron_number5/7
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw32726
MethodWGS_Hawaiian_Waterston