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WormBase Tree Display for Variation: WBVar00008273

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Name Class

WBVar00008273NamePublic_nameWBVar00008273
Other_namehaw32777
haw135903
cewivar00098852
Y48E1B.3d.1:c.739-394G>A
Y48E1B.3a.1:c.284-4996G>A
Y48E1B.3c.1:c.1240-394G>A
HGVSgCHROMOSOME_II:g.13558395C>T
Sequence_detailsSMapS_parentSequenceY48E1B
Flanking_sequencesgaaaacgatcgttttttgttgcagtttcaagctatttccggataaaaaat
Mapping_targetY48E1B
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (27)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01382196
WBVar00555768
WBVar01250603
WBVar01317247
StatusLive
AffectsGeneWBGene00013002
TranscriptY48E1B.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48E1B.3a.1:c.284-4996G>A
Intron_number4/7
Y48E1B.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48E1B.3c.1:c.1240-394G>A
Intron_number7/9
Y48E1B.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48E1B.3d.1:c.739-394G>A
Intron_number1/2
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw32777
MethodWGS_Hawaiian_Waterston