Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00008438

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00008438EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00008438
Other_namehaw32810
cewivar00188316
Y48E1B.3a.1:c.162-1133A>T
Y48E1B.3c.1:c.-248-1133A>T
HGVSgCHROMOSOME_II:g.13565920T>A
Sequence_detailsSMapS_parentSequenceY48E1B
Flanking_sequencestccatcaaaatttcgcaatttttttaatttaggggaaaaattggtgtttt
Mapping_targetY48E1B
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00006629From_analysisMillion_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00023138From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01317279
WBVar01382238
StatusLive
AffectsGeneWBGene00013002
TranscriptY48E1B.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48E1B.3a.1:c.162-1133A>T
Intron_number3/7
Y48E1B.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48E1B.3c.1:c.-248-1133A>T
Intron_number2/9
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw32810
MethodWGS_Hawaiian_Waterston