WormBase Tree Display for Variation: WBVar00008643
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WBVar00008643 | Name | Public_name | WBVar00008643 | ||
---|---|---|---|---|---|
Other_name | haw32851 | ||||
haw135941 | |||||
cewivar00188344 | |||||
CE44418:p.Val6= | |||||
Y48E1B.11.1:c.18C>T | |||||
HGVSg | CHROMOSOME_II:g.13596526G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y48E1B | |
Flanking_sequences | atgataaatatttgaatatgcatgg | acgctttcagaatacattttaagct | |||
Mapping_target | Y48E1B | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00555806 | |||
WBVar01382294 | |||||
Status | Live | ||||
Affects | Gene | WBGene00013009 | |||
Transcript | Y48E1B.11.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y48E1B.11.1:c.18C>T | ||||
HGVSp | CE44418:p.Val6= | ||||
cDNA_position | 30 | ||||
CDS_position | 18 | ||||
Protein_position | 6 | ||||
Exon_number | 2/7 | ||||
Codon_change | gtC/gtT | ||||
Amino_acid_change | V | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw32851 | ||||
Method | WGS_Hawaiian_Waterston |