WormBase Tree Display for Variation: WBVar00009110

WBVar00009110 Name: Public_name: WBVar00009110
    Other_name: haw82920
      cewivar00242692
      W04D2.1c.1:c.642+170A>T
      W04D2.1d.1:c.482-56A>T
      W04D2.1a.1:c.855+170A>T
      W04D2.1b.1:c.695-56A>T
    HGVSg: CHROMOSOME_V:g.12481058A>T
  Sequence_details: SMap: S_parent: Sequence: W04D2
    Flanking_sequences: acacaaagttgttttgctttttttt aataattatcttccgatttttattt
    Mapping_target: W04D2
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00000228
    Transcript: W04D2.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W04D2.1b.1:c.695-56A>T
        Intron_number: 4/10
      W04D2.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W04D2.1d.1:c.482-56A>T
        Intron_number: 2/7
      W04D2.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W04D2.1c.1:c.642+170A>T
        Intron_number: 3/7
      W04D2.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W04D2.1a.1:c.855+170A>T
        Intron_number: 5/10
  Remark: [20081124 db] this Variation was previously named hw82920
  Method: WGS_Hawaiian_Waterston