WormBase Tree Display for Variation: WBVar00010578
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WBVar00010578 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00010578 | |||
Other_name | haw33238 | ||||
cewivar00143474 | |||||
ZK131.11a.1:c.85+819C>A | |||||
ZK131.11b.1:c.421+5625C>A | |||||
HGVSg | CHROMOSOME_II:g.13808905C>A | ||||
Sequence_details | SMap | S_parent | Sequence | ZK131 | |
Flanking_sequences | tttttctggaagctcaaattatgtt | tttttaaactaaagtgctctaacat | |||
Mapping_target | ZK131 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01383004 | |||
Status | Live | ||||
Affects | Gene | WBGene00013934 | |||
Transcript | ZK131.11b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK131.11b.1:c.421+5625C>A | ||||
Intron_number | 5/9 | ||||
ZK131.11a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK131.11a.1:c.85+819C>A | ||||
Intron_number | 2/6 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw33238 | ||||
Method | WGS_Hawaiian_Waterston |