WormBase Tree Display for Variation: WBVar00011078
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| WBVar00011078 | Name | Public_name | WBVar00011078 | ||
|---|---|---|---|---|---|
| Other_name | pas11629 | ||||
| haw33338 | |||||
| haw136313 | |||||
| cewivar00188733 | |||||
| Y51H1A.3a.1:c.398+739A>G | |||||
| Y51H1A.3b.1:c.446+739A>G | |||||
| HGVSg | CHROMOSOME_II:g.13874086A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y51H1A | |
| Flanking_sequences | ttctgactaaaaaccggaattattg | aattttcagggtttttttttccaat | |||
| Mapping_target | Y51H1A | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar00556178 | |||
| WBVar01251675 | |||||
| WBVar01318386 | |||||
| WBVar01383143 | |||||
| WBVar00106770 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00013094 | |||
| Transcript | Y51H1A.3a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y51H1A.3a.1:c.398+739A>G | ||||
| Intron_number | 3/4 | ||||
| Y51H1A.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y51H1A.3b.1:c.446+739A>G | ||||
| Intron_number | 1/2 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw33338 | ||||
| Method | WGS_Hawaiian_Waterston |
