WormBase Tree Display for Variation: WBVar00011940
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| WBVar00011940 | Name | Public_name | WBVar00011940 | ||
|---|---|---|---|---|---|
| Other_name | haw83486 | ||||
| cewivar00243350 | |||||
| T09E8.1g.1:c.-818-461T>C | |||||
| T09E8.1b.1:c.53-461T>C | |||||
| T09E8.1f.1:c.59-461T>C | |||||
| T09E8.1h.1:c.752-461T>C | |||||
| T09E8.1c.1:c.752-461T>C | |||||
| CE31987:p.Val34Ala | |||||
| T09E8.1a.1:c.101T>C | |||||
| HGVSg | CHROMOSOME_V:g.13161854T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | K03H4 | |
| Flanking_sequences | actgtaatcatagcgccaaagaagg | attgacttcaaattcgtcgtcttct | |||
| Mapping_target | K03H4 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00011647 | |||
| WBGene00305502 | |||||
| Transcript | K03H4.9 | ||||
| T09E8.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T09E8.1h.1:c.752-461T>C | ||||
| Intron_number | 7/16 | ||||
| T09E8.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T09E8.1c.1:c.752-461T>C | ||||
| Intron_number | 2/10 | ||||
| T09E8.1a.1 (12) | |||||
| T09E8.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T09E8.1f.1:c.59-461T>C | ||||
| Intron_number | 1/9 | ||||
| T09E8.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T09E8.1g.1:c.-818-461T>C | ||||
| Intron_number | 1/10 | ||||
| T09E8.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T09E8.1b.1:c.53-461T>C | ||||
| Intron_number | 1/9 | ||||
| Remark | [20081124 db] this Variation was previously named hw83486 | ||||
| Method | WGS_Hawaiian_Waterston |
