WormBase Tree Display for Variation: WBVar00013635
expand all nodes | collapse all nodes | view schema
WBVar00013635 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00013635 | |||
Other_name | haw83825 | ||||
haw170773 | |||||
cewivar00243748 | |||||
F35E12.9b.1:c.807-321G>A | |||||
F35E12.9a.1:c.*381G>A | |||||
F35E12.9c.1:c.693-321G>A | |||||
HGVSg | CHROMOSOME_V:g.13742254C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F35E12 | |
Flanking_sequences | atttcgaaaccgtaaggtcatactt | gtcttaaataaaatttcaaccaccg | |||
Mapping_target | F35E12 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00590638 | |||
Status | Live | ||||
Affects | Gene | WBGene00009433 | |||
Transcript | F35E12.9c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F35E12.9c.1:c.693-321G>A | ||||
Intron_number | 4/5 | ||||
F35E12.9a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F35E12.9a.1:c.*381G>A | ||||
cDNA_position | 1287 | ||||
Exon_number | 5/6 | ||||
F35E12.9b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F35E12.9b.1:c.807-321G>A | ||||
Intron_number | 6/8 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw83825 | ||||
Method | WGS_Hawaiian_Waterston |