WormBase Tree Display for Variation: WBVar00014333
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WBVar00014333 | Name | Public_name | WBVar00014333 | ||
---|---|---|---|---|---|
Other_name | pas43884 | ||||
haw33989 | |||||
haw136837 | |||||
cewivar00101000 | |||||
Y54G11A.4.1:c.174A>G | |||||
CE43439:p.Lys58= | |||||
HGVSg | CHROMOSOME_II:g.14292997A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y54G11A | |
Flanking_sequences | gcggatttgatgcttcggcagagaa | cttgcatcttcggatcctgaagcaa | |||
Mapping_target | Y54G11A | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (29) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00556702 | |||
WBVar01252908 | |||||
WBVar00232108 | |||||
WBVar01384245 | |||||
WBVar01319854 | |||||
Status | Live | ||||
Affects | Gene | WBGene00013215 | |||
Transcript | Y54G11A.4.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y54G11A.4.1:c.174A>G | ||||
HGVSp | CE43439:p.Lys58= | ||||
cDNA_position | 179 | ||||
CDS_position | 174 | ||||
Protein_position | 58 | ||||
Exon_number | 2/8 | ||||
Codon_change | aaA/aaG | ||||
Amino_acid_change | K | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw33989 | ||||
Method | WGS_Hawaiian_Waterston |