WormBase Tree Display for Variation: WBVar00014823
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| WBVar00014823 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00014823 | |||
| Other_name | haw34087 | ||||
| cewivar00144461 | |||||
| R06A4.10a.1:c.*98T>C | |||||
| R06A4.4c.1:c.*519A>G | |||||
| R06A4.4a.1:c.*519A>G | |||||
| R06A4.4b.1:c.*519A>G | |||||
| R06A4.10b.1:c.*98T>C | |||||
| HGVSg | CHROMOSOME_II:g.14373890A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | R06A4 | |
| Flanking_sequences | ttcatggtttattataaatttttgt | accacaaaaaatccaaaccagcaat | |||
| Mapping_target | R06A4 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01384412 | |||
| WBVar01320004 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000059 | |||
| WBGene00002076 | |||||
| Transcript | R06A4.10b.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R06A4.10b.1:c.*98T>C | ||||
| cDNA_position | 1779 | ||||
| Exon_number | 11/11 | ||||
| R06A4.10a.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R06A4.10a.1:c.*98T>C | ||||
| cDNA_position | 1782 | ||||
| Exon_number | 11/11 | ||||
| R06A4.4a.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R06A4.4a.1:c.*519A>G | ||||
| cDNA_position | 3209 | ||||
| Exon_number | 9/9 | ||||
| R06A4.4b.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R06A4.4b.1:c.*519A>G | ||||
| cDNA_position | 1817 | ||||
| Exon_number | 8/8 | ||||
| R06A4.4c.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | R06A4.4c.1:c.*519A>G | ||||
| cDNA_position | 3227 | ||||
| Exon_number | 9/9 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw34087 | ||||
| Method | WGS_Hawaiian_Waterston |
