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WormBase Tree Display for Variation: WBVar00015888

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Name Class

WBVar00015888NamePublic_nameWBVar00015888
Other_namepkP2159
haw34300
haw137069
cewivar00189239
C13B4.1e.1:c.568-316T>C
C13B4.1d.1:c.568-316T>C
C13B4.1b.1:c.568-316T>C
C13B4.1a.1:c.568-316T>C
HGVSgCHROMOSOME_II:g.14477854A>G
Sequence_detailsSMapS_parentSequenceC13B4
Flanking_sequencesttgacagattatgcatctaatgacattcggtttaatgataaattttaagc
Mapping_targetC13B4
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
WGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar00556934
WBVar00240523
WBVar01384673
StatusLive
AffectsGeneWBGene00007545
TranscriptC13B4.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC13B4.1a.1:c.568-316T>C
Intron_number4/13
C13B4.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC13B4.1b.1:c.568-316T>C
Intron_number3/10
C13B4.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC13B4.1d.1:c.568-316T>C
Intron_number3/12
C13B4.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC13B4.1e.1:c.568-316T>C
Intron_number4/12
ReferenceWBPaper00038208
WBPaper00004703
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw34300
MethodWGS_Hawaiian_Waterston