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WormBase Tree Display for Variation: WBVar00016420

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Name Class

WBVar00016420NamePublic_nameWBVar00016420
Other_namehaw84382
cewivar00244420
Y40H4A.1a.3:c.1671-127A>C
Y40H4A.1a.2:c.1671-127A>C
Y40H4A.1a.1:c.1671-127A>C
Y40H4A.1b.1:c.1749-127A>C
HGVSgCHROMOSOME_V:g.14565282T>G
Sequence_detailsSMapS_parentSequenceC53A5
Flanking_sequencesaagtcgtcattttcattttcaaattcataaccagaatttaataaacattc
Mapping_targetC53A5
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001519
TranscriptY40H4A.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40H4A.1a.1:c.1671-127A>C
Intron_number11/12
Y40H4A.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40H4A.1b.1:c.1749-127A>C
Intron_number9/10
Y40H4A.1a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40H4A.1a.3:c.1671-127A>C
Intron_number10/11
Y40H4A.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY40H4A.1a.2:c.1671-127A>C
Intron_number9/10
Remark[20081124 db] this Variation was previously named hw84382
MethodWGS_Hawaiian_Waterston