WormBase Tree Display for Variation: WBVar00016420
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WBVar00016420 | Name | Public_name | WBVar00016420 | ||
---|---|---|---|---|---|
Other_name | haw84382 | ||||
cewivar00244420 | |||||
Y40H4A.1a.3:c.1671-127A>C | |||||
Y40H4A.1a.2:c.1671-127A>C | |||||
Y40H4A.1a.1:c.1671-127A>C | |||||
Y40H4A.1b.1:c.1749-127A>C | |||||
HGVSg | CHROMOSOME_V:g.14565282T>G | ||||
Sequence_details | SMap | S_parent | Sequence | C53A5 | |
Flanking_sequences | aagtcgtcattttcattttcaaatt | cataaccagaatttaataaacattc | |||
Mapping_target | C53A5 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001519 | |||
Transcript | Y40H4A.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y40H4A.1a.1:c.1671-127A>C | ||||
Intron_number | 11/12 | ||||
Y40H4A.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y40H4A.1b.1:c.1749-127A>C | ||||
Intron_number | 9/10 | ||||
Y40H4A.1a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y40H4A.1a.3:c.1671-127A>C | ||||
Intron_number | 10/11 | ||||
Y40H4A.1a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y40H4A.1a.2:c.1671-127A>C | ||||
Intron_number | 9/10 | ||||
Remark | [20081124 db] this Variation was previously named hw84382 | ||||
Method | WGS_Hawaiian_Waterston |